ID A0A261C4W9_9PELO Unreviewed; 933 AA.
AC A0A261C4W9;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
DE Flags: Fragment;
GN ORFNames=FL83_08182 {ECO:0000313|EMBL:OZG17563.1};
OS Caenorhabditis latens.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1503980 {ECO:0000313|EMBL:OZG17563.1, ECO:0000313|Proteomes:UP000216463};
RN [1] {ECO:0000313|EMBL:OZG17563.1, ECO:0000313|Proteomes:UP000216463}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PX534 {ECO:0000313|EMBL:OZG17563.1,
RC ECO:0000313|Proteomes:UP000216463};
RA Fierst J.L.;
RT "Caenorhabditis latens genome sequence.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the patched family.
CC {ECO:0000256|ARBA:ARBA00005585}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OZG17563.1}.
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DR EMBL; NIPN01000036; OZG17563.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A261C4W9; -.
DR STRING; 1503980.A0A261C4W9; -.
DR Proteomes; UP000216463; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0022857; F:transmembrane transporter activity; IEA:InterPro.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR001036; Acrflvin-R.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR PANTHER; PTHR10796:SF192; SSD DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02460; Patched; 1.
DR PRINTS; PR00702; ACRIFLAVINRP.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000216463};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 26..46
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 268..289
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 301..324
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 331..354
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 374..397
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 409..430
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 487..510
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 699..725
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 731..751
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 758..780
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 800..822
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 834..857
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 262..428
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OZG17563.1"
SQ SEQUENCE 933 AA; 104730 MW; 2069089E71D82B4F CRC64;
MAWDCVERRV ASLFRQLGFI VCDHPLPFLV FPLLFTAAMG VGLLHLNPLS DAVYLFTPVG
AQSKMERMSI HEKWPLTDNN YIPGRAVTQS REIQVTALAR NDSNILESKF ANAVYQLDKY
IQTRVRVLHD GHYYSYKNLC LQYKNGGCPS NKHVHILSDL YNHGFNITYP YFRFGSEGGY
IGSSLGGVTV MKGENETDIL ASAKAWFMIY HLKFHPEEMS YISGEWELEL GRMLTEYPED
PYISITYFHS QTLADELKRN ADTLVPRFVI SFTLLIVFST ICSLCFIDGS FYIDWVLSKP
ILSILGVFNA GIAILTGIGC LSLMGMPYND IVGVMPFLVV AVGTDNMFLM VAAVRRTSRT
HTVHERMGEC MADAAVSILI TSSTDVLSFG VGTITTIPAV QIFCVYTGVA LFFAFVYQIT
FFAACLALAM KHEAAGRNSF FFVESVPIEK KKSQSTLQRI FNLGSVTDHS ASNDVKQPLT
ARFFGEWYAP VLMHPVVRLI AMVWFVIYLL GASYGCSRIK EGLEPVNLLV EDSYAIPHYR
LLEKYFWKYG QQVQIVINNA PDLRNHTSRD RVHAMVLDFA TSKHAIGMES VQFWLFEMER
YYQKELQVQI IDSSFYGLLQ HFLASKTNNP LAEDIYWGSM PDDENGTMVQ SFRFIVGMKD
LVTTMDQTDA TMSFREVATR WPEFNVTTFM PIWMFTDQYV IIIPNTVQNI IIALLVMIVI
AVLFIPQPMC SLWVALACAS IDFGVIGYMT LWGVNLDAIS MITIIMSIGF SVDYSAHIAY
GYVVSTRDTA AGRVQEALSA LGWPLFQGGM STIIAVSVLA DIPAYMIVTF FKTVVLSISL
GLLHGLVFLP VLLSIFVRGC CIIPSTPHGH HSAQKIEKQM KVATITGTPV HLNTVAPLRA
SSPISFPHRF EYTDESPTVH NRSKTSMKSE HLD
//