ID A0A261CJ77_9PELO Unreviewed; 1267 AA.
AC A0A261CJ77;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 13-SEP-2023, entry version 25.
DE RecName: Full=IF rod domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=FL83_03226 {ECO:0000313|EMBL:OZG22582.1};
OS Caenorhabditis latens.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1503980 {ECO:0000313|EMBL:OZG22582.1, ECO:0000313|Proteomes:UP000216463};
RN [1] {ECO:0000313|EMBL:OZG22582.1, ECO:0000313|Proteomes:UP000216463}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PX534 {ECO:0000313|EMBL:OZG22582.1,
RC ECO:0000313|Proteomes:UP000216463};
RA Fierst J.L.;
RT "Caenorhabditis latens genome sequence.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OZG22582.1}.
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DR EMBL; NIPN01000005; OZG22582.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A261CJ77; -.
DR STRING; 1503980.A0A261CJ77; -.
DR Proteomes; UP000216463; Unassembled WGS sequence.
DR GO; GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.500; Single helix bin; 1.
DR InterPro; IPR039008; IF_rod_dom.
DR InterPro; IPR001322; Lamin_tail_dom.
DR PANTHER; PTHR45721:SF1; INTERMEDIATE FILAMENT PROTEIN IFC-2; 1.
DR PANTHER; PTHR45721; LAMIN DM0-RELATED; 1.
DR Pfam; PF00038; Filament; 1.
DR SMART; SM01391; Filament; 1.
DR SUPFAM; SSF64593; Intermediate filament protein, coiled coil region; 2.
DR PROSITE; PS51842; IF_ROD_2; 1.
DR PROSITE; PS51841; LTD; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Intermediate filament {ECO:0000256|ARBA:ARBA00022754};
KW Reference proteome {ECO:0000313|Proteomes:UP000216463}.
FT DOMAIN 698..1046
FT /note="IF rod"
FT /evidence="ECO:0000259|PROSITE:PS51842"
FT DOMAIN 1154..1267
FT /note="LTD"
FT /evidence="ECO:0000259|PROSITE:PS51841"
FT REGION 1..26
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 77..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 131..151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 302..363
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 554..573
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 612..641
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1118..1151
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 695..729
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 967..1024
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 302..334
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..349
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1137..1151
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OZG22582.1"
SQ SEQUENCE 1267 AA; 143386 MW; 5981F627D82BE184 CRC64;
MSLTSTPFST DDERYSGYTN SAMSPPIQKQ LIQEVSLSYS APYTSTVKPS RHDLPLAFSP
YSLESEYEKI DDLHSHTYSN DSRLSKHSNS TSKKVDSVER LLNTGRKETE FPAQSEQVPY
FSAQSAIKAG RVTPAHTPRG TPRDTPRDTP VSFDQISTGR LDSPGSQNLI VSESTTFEEL
TTITTSNNRT TRKKEIKTEM PTVNALTKQF EISSHQERVV PLRPRKNSNT PVSVNGNAKS
RSRVVVIDKS ERNSNYAPNR SAVVYSPGGI LTTTIVDIEP ARFGRRTEEY KIEEQYIVKR
YDNDSPNNYQ GQGQGFQKQQ TTEYRAYQTN QKQDNYNDRT REKSHRSYSA AENRQNLDSP
VDTSPIDVVK NVIDRWETKI GGTTTRTNEQ QLRSVSRVDM NDNVSRNTQE KIIVRQRSES
QPIERVIPIS PLPPPTEPIR QTQGLVQTYE EFKTVLVKQS VDPEPVAPLA YTPEVVTSPI
ETVVSPPPIP TPSPTLDIAE EEIVRTDETV TTQHTITEHS ILTKETKQEE EKKYVTDSRK
VAVEVAEVVT EEKAVEEKEK QKPLTPTPTP VPQYSEEKIE TVETTETKKD EEYLHHFLDR
DYRIKTYEEW STTRRLRDRS QPPERPPTSY SSYSDRSKSI DRTYERRVLG SGMSRTYSEG
RGLASGAGYT SGFGGLVSGM SSAGAICTTQ IRDAREREKR EIGLLNDRLA DYIEKVRFLE
AQNQCLSHDI DILRRGFSGG GHVSGLYDTE IAQAKRILEQ IIAGRTVFDR DITALSADID
GFRKKWIDAV NAVKAHREDH DVDLDRLSKI EAEISLYKRK IRIVEEDVIR IRRENDGIYN
EIARIKQLTH NEIALKNERS LNVQDLLQRI KLCQTENSTK IEQELVFIRR DTTAENRDYF
RHELQAAIRD IRADYEAISI RNRNDIEVWY REQIRKIQSE STRVNPDLYK EELASIRSTV
TSVKSRLAEV EGRNFFLEKL IEDLRNNEES KMFEISLAEK DAQIARLREQ CTELSIQMER
LCDNEISLRA EIERYRVLLN GANVTTYVSN THPATSQIHV GGNVGSTRVI SQTTRTHSSS
NTSYTGVPAS RSGTGYTVGG NIGGISVGGT IGAHGASGHV SGGAAGSETR SSVASLISEK
RPDRVHDEKG VDASGRNFHS WYLGTISINQ VTPSYIELKN ICKIRRVDVG GFRVEQSVNG
HLLGSAQINV PLILDPQEVV RFNHRHGKYL GQFFMDVDAF DNSVNARTSM FNYSEPDEER
AWFVYLD
//
