ID A0A261DC61_9RICK Unreviewed; 286 AA.
AC A0A261DC61;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=Ribonuclease D {ECO:0000313|EMBL:OZG32095.1};
GN ORFNames=RiCNE_05070 {ECO:0000313|EMBL:OZG32095.1};
OS Rickettsia endosymbiont of Culicoides newsteadi.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rickettsiales;
OC Rickettsiaceae; Rickettsieae; Rickettsia.
OX NCBI_TaxID=1961830 {ECO:0000313|EMBL:OZG32095.1, ECO:0000313|Proteomes:UP000216097};
RN [1] {ECO:0000313|EMBL:OZG32095.1, ECO:0000313|Proteomes:UP000216097}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RiCNE {ECO:0000313|EMBL:OZG32095.1,
RC ECO:0000313|Proteomes:UP000216097};
RX PubMed=28805302;
RA Pilgrim J., Ander M., Garros C., Baylis M., Hurst G.D.D., Siozios S.;
RT "Torix group Rickettsia are widespread in Culicoides biting midges
RT (Diptera: Ceratopogonidae), reach high frequency and carry unique genomic
RT features.";
RL Environ. Microbiol. 19:4238-4255(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OZG32095.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; MWZE01000019; OZG32095.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A261DC61; -.
DR OrthoDB; 9800549at2; -.
DR Proteomes; UP000216097; Unassembled WGS sequence.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000216097}.
FT DOMAIN 207..286
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
SQ SEQUENCE 286 AA; 33852 MW; 8E98203E1E1A4F6A CRC64;
MLIIDNQKIL NEFCRQLLDC KTISVDTEFL RKNTYFAQLS IIQIMTSSHK VIIDTLCDLD
LSPLNEIFLN EKILKIFHAP REDFEIFYHL FKKLPRNVFD IQIAAGICDF GKHLSYSDIC
SKICFVHIDK TYQRSDWLKR PISANLLDYA IKDVEYLEPI YKILQSIIQD NNLQNEYDEQ
IKSLLNIKNY IVDTKKAWQK VRFHNHSEFF INKMKIMAAY REEQASTIDL PRRHFISDEE
LVKICQHLPT SNKDFENLKL NGRYLSKQKY RTQLADLCLA IQELGE
//