ID A0A261F2J3_9BIFI Unreviewed; 443 AA.
AC A0A261F2J3;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=Ribonuclease D {ECO:0000313|EMBL:OZG53283.1};
GN ORFNames=PSRA_0090 {ECO:0000313|EMBL:OZG53283.1};
OS Pseudoscardovia radai.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Pseudoscardovia.
OX NCBI_TaxID=987066 {ECO:0000313|EMBL:OZG53283.1, ECO:0000313|Proteomes:UP000216725};
RN [1] {ECO:0000313|EMBL:OZG53283.1, ECO:0000313|Proteomes:UP000216725}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 24742 {ECO:0000313|EMBL:OZG53283.1,
RC ECO:0000313|Proteomes:UP000216725};
RX PubMed=28764658; DOI=10.1186/s12864-017-3955-4;
RA Lugli G.A., Milani C., Turroni F., Duranti S., Mancabelli L.,
RA Mangifesta M., Ferrario C., Modesto M., Mattarelli P., Jiri K.,
RA van Sinderen D., Ventura M.;
RT "Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae
RT family.";
RL BMC Genomics 18:568-568(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OZG53283.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; MWWR01000002; OZG53283.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A261F2J3; -.
DR Proteomes; UP000216725; Unassembled WGS sequence.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR Gene3D; 1.10.150.80; HRDC domain; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR041605; Exo_C.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF18305; DNA_pol_A_exoN; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
FT DOMAIN 201..281
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
FT REGION 408..443
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 443 AA; 49748 MW; 29F6CA29C34D54A3 CRC64;
MVDRYAAADG PLAADAERAS GYRYGQQDWL VQFKRAGAGI ALVDPVALAQ RGVDWGPFNE
AVGDAEWIIH DSLQDLPGFV QIGLAPKALF DTEFAARLLG RQRFGLAACT EHYLGLTLAK
EHSAADWSYR PLGRDLRDYA ALDVEVLIEL RARMVDDIES QGKEGWAREE FAHLLRKGTT
PKDPPEEPWR RTSHITQLNH DRRGLAIVRE LWTERDALAR ELDIAPTLLL PDAALIKAAV
AKPRNSRQFS QIRILNERVR MHVGGERDKM FERYAPLQRK VKPSVWKNAI LRALALPESD
LPSASGGQDR VEEGTNAPRS MKYWRVHHPD RFDLLEHERA RLNVISQDTN TPVDVLLRPQ
ALRNLCWQAG EGFVEASEDA VAGFLRSQDA RPWQVSLLSR PLAVQMREAQ ERQTQEDRQA
WEPQGHGAPE RAGSMQAAGG AIV
//
