ID A0A263DLS2_9PSEU Unreviewed; 314 AA.
AC A0A263DLS2;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE SubName: Full=Flap endonuclease {ECO:0000313|EMBL:OZM78537.1};
GN ORFNames=CFP66_29865 {ECO:0000313|EMBL:OZM78537.1};
OS Pseudonocardia sp. MH-G8.
OC Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC Pseudonocardiaceae; Pseudonocardia.
OX NCBI_TaxID=1854588 {ECO:0000313|EMBL:OZM78537.1, ECO:0000313|Proteomes:UP000216936};
RN [1] {ECO:0000313|EMBL:OZM78537.1, ECO:0000313|Proteomes:UP000216936}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MH-G8 {ECO:0000313|EMBL:OZM78537.1,
RC ECO:0000313|Proteomes:UP000216936};
RA Wang J., Leiva S., Huang J., Huang Y.;
RT "Non-contiguous finished genome sequence and description of Pseudonocardia
RT marinum sp. nov., an obligate marine actinomycete from a macroalgal
RT phycosphere.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OZM78537.1}.
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DR EMBL; NKYF01000017; OZM78537.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A263DLS2; -.
DR OrthoDB; 9806424at2; -.
DR Proteomes; UP000216936; Unassembled WGS sequence.
DR GO; GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro.
DR CDD; cd09898; H3TH_53EXO; 1.
DR CDD; cd09859; PIN_53EXO; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR InterPro; IPR002421; 5-3_exonuclease.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR020045; DNA_polI_H3TH.
DR InterPro; IPR038969; FEN.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR PANTHER; PTHR42646:SF2; DNA-DIRECTED DNA POLYMERASE; 1.
DR PANTHER; PTHR42646; FLAP ENDONUCLEASE XNI; 1.
DR Pfam; PF01367; 5_3_exonuc; 1.
DR Pfam; PF02739; 5_3_exonuc_N; 1.
DR SMART; SM00475; 53EXOc; 1.
DR SMART; SM00279; HhH2; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000313|EMBL:OZM78537.1};
KW Hydrolase {ECO:0000313|EMBL:OZM78537.1};
KW Nuclease {ECO:0000313|EMBL:OZM78537.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000216936}.
FT DOMAIN 1..281
FT /note="5'-3' exonuclease"
FT /evidence="ECO:0000259|SMART:SM00475"
SQ SEQUENCE 314 AA; 33109 MW; F1358B4DF6463912 CRC64;
MLLDAASMYF RAFYGVPESI TAPDGTPVNA VRGFTDMVAR LITDRRPTRL VACLDLDWRP
AFRVQALPSY KAHRVPGEPE VAPAGLPEEV PDLLAPQVPV LLEVLAAAGI ATGGAEGYEA
DDVIGTLAAG ERTDPVLAVS GDRDLMQIVR DEPVPVRLLY VGRGLAKAEH LGPVEVAAKY
GVPADRAGTA YAEMAMLRGD PSDGLPGVPG IGTKTAATLV GRFGSWDELR AAVIDKADTR
LSPPVRVKLA AAAPYLAVVE PVVRVAVDAE VRLDRPDTLP AEPADLPRLA ALGERWGIGS
SIERLCTAMA KNAS
//