ID A0A271J8F6_9BACT Unreviewed; 506 AA.
AC A0A271J8F6;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:PAP79821.1};
GN ORFNames=B1759_11020 {ECO:0000313|EMBL:PAP79821.1};
OS Rubrivirga sp. SAORIC476.
OC Bacteria; Rhodothermota; Rhodothermia; Rhodothermales; Rubricoccaceae;
OC Rubrivirga.
OX NCBI_TaxID=1961794 {ECO:0000313|EMBL:PAP79821.1, ECO:0000313|Proteomes:UP000216627};
RN [1] {ECO:0000313|EMBL:PAP79821.1, ECO:0000313|Proteomes:UP000216627}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SAORIC476 {ECO:0000313|EMBL:PAP79821.1,
RC ECO:0000313|Proteomes:UP000216627};
RA Kumagai Y., Kogure K., Yoshizawa S.;
RT "Whole genome sequence of Rhodothermus Rubrivirga sp. SAORIC476.";
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PAP79821.1}.
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DR EMBL; MVOI01000004; PAP79821.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A271J8F6; -.
DR OrthoDB; 9811901at2; -.
DR Proteomes; UP000216627; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF113; HYDROGENASE TRANSCRIPTIONAL REGULATORY PROTEIN HOXA; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF13185; GAF_2; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 196..425
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 506 AA; 54990 MW; CB177C67275EA3A8 CRC64;
MPAPPPHDAS AALAALSEIA AALNSAREPE AVLDAVLDAT LDALGAERGF VLLEGDGGRD
APFEVRASRN FSGDDLAGVR PLSTSVVQEV LRTGEPVLVY EAEADERYGG VESVVLQHIQ
SIACVPLRLR ARQVGAVYLD AVRTRGRFTR DHLPFLRAVA DQAAIALDAA RRETALRDEN
RRLLAEARDR HGFAEILGTS PAMEGLFETL RRVLDTDATI LVEGETGTGK ELVARALHYE
GPRAAQPFVA LFCGSLPDEL LESELFGHRK GAFTGAATDK KGLFEAADGG TVFLDEVGDL
SPKLQTALLR VLQTGEVRRV GDTVSRRVNV RVVSATNRPL ADLVEDGTFR EDLLYRLNTI
RVEMPPLRHR GTDAMLLATH FLDRFATGSR AHVDGFSAAA LDAIRRYRWP GNVRELEGAV
ERAVVLTRGS TVQAEDLRLP DLPADDALDL TPGMTMKEVE RLAVERTLAA CDGNISATAR
TLGVSRRWIQ YRLKEWDGGE RAPETA
//
