ID A0A286U1Y3_9BACT Unreviewed; 422 AA.
AC A0A286U1Y3;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=CRISPR system Cms protein Csm5 {ECO:0000256|ARBA:ARBA00016113};
DE AltName: Full=CRISPR type III A-associated protein Csm5 {ECO:0000256|ARBA:ARBA00031720};
GN ORFNames=SCALIN_C28_0364 {ECO:0000313|EMBL:GAX62160.1};
OS Candidatus Scalindua japonica.
OC Bacteria; Planctomycetota; Candidatus Brocadiia; Candidatus Brocadiales;
OC Candidatus Scalinduaceae; Scalindua.
OX NCBI_TaxID=1284222 {ECO:0000313|EMBL:GAX62160.1, ECO:0000313|Proteomes:UP000218542};
RN [1] {ECO:0000313|Proteomes:UP000218542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=husup-a2 {ECO:0000313|Proteomes:UP000218542};
RA Oshiki M., Mizuto K., Kimura Z., Kindaichi T., Satoh H., Okabe S.;
RT "Genetic Diversity of Marine Anaerobic Ammonium-Oxidizing Bacteria as
RT Revealed by Genomic and Proteomic Analyses of 'Candidatus Scalindua
RT japonica'.";
RL Environ. Microbiol. Rep. 0:0-0(2017).
CC -!- FUNCTION: This subunit might be involved in maturation of a crRNA
CC intermediate to its mature form. {ECO:0000256|ARBA:ARBA00003088}.
CC -!- SIMILARITY: Belongs to the CRISPR-associated Csm5 family.
CC {ECO:0000256|ARBA:ARBA00006680}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAX62160.1}.
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DR EMBL; BAOS01000028; GAX62160.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A286U1Y3; -.
DR OrthoDB; 24360at2; -.
DR Proteomes; UP000218542; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0051607; P:defense response to virus; IEA:UniProtKB-KW.
DR InterPro; IPR010173; CRISPR-assoc_Csm5.
DR InterPro; IPR005537; RAMP_III_fam.
DR NCBIfam; TIGR01899; cas_TM1807_csm5; 1.
DR PANTHER; PTHR38007; CRISPR SYSTEM CMS PROTEIN CSM5; 1.
DR PANTHER; PTHR38007:SF1; CRISPR SYSTEM CMS PROTEIN CSM5; 1.
DR Pfam; PF03787; RAMPs; 1.
PE 3: Inferred from homology;
KW Antiviral defense {ECO:0000256|ARBA:ARBA00023118};
KW Reference proteome {ECO:0000313|Proteomes:UP000218542};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
SQ SEQUENCE 422 AA; 49497 MW; B9519A0947B51239 CRC64;
MNFLENKVVN IKTITPIHIK GKDIDYGQGF VRRNNETAFA IDSNRLVEYL FQKTNDLSLV
TKYVNQIEEY TNKGKLNKFD NEKFLFDTGI YHTKNKKENE KELIEFGVFK SLVNATRGNM
FIKNGPGQPI IPGSSIKGVI RTAVMYHMAK EFLKHKESNI VKSFLDNISS KISDFIQKTK
NMSPRQKDIE KSRFSQQLSL FIFQNGKTRM DTKSDFLRCV KVKDTKRLAN MNMHKVVLVS
LKGLNNITNK KPTHDKLQLA DKFTIKMKLD KKEQPIDFEI ETFTGETNFL ITIDRVLLKE
FKRKKYNIPF SDIKGIFNLV RQFSQDLWMF EKNFFDNCLN DQLNISDVQD FYRNNNYEHK
FRIGWGTGLM GMTIDMLLDD ISQKKLRNHM FVDKKDCPAP KSRRLIYKNN QVTKPLGWMK
FS
//
