ID   A0A286UPA0_9AGAM        Unreviewed;      1139 AA.
AC   A0A286UPA0;
DT   31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT   31-JAN-2018, sequence version 1.
DT   28-JUN-2023, entry version 17.
DE   RecName: Full=RNA polymerase II assembly factor Rtp1 C-terminal domain-containing protein {ECO:0000259|Pfam:PF10363};
GN   ORFNames=PNOK_0402700 {ECO:0000313|EMBL:PAV21400.1};
OS   Pyrrhoderma noxium.
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Hymenochaetales; Hymenochaetaceae; Pyrrhoderma.
OX   NCBI_TaxID=2282107 {ECO:0000313|EMBL:PAV21400.1, ECO:0000313|Proteomes:UP000217199};
RN   [1] {ECO:0000313|Proteomes:UP000217199}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FFPRI411160 {ECO:0000313|Proteomes:UP000217199};
RA   Chung C.-L., Lee J.T., Akiba M., Lee H.-H., Kuo T.-H., Liu D., Ke H.-M.,
RA   Yokoi T., Roa M.B., Lu M.J., Chang Y.-Y., Ann P.-J., Tsai J.-N.,
RA   Chen C.-Y., Tzean S.-S., Ota Y., Hattori T., Sahashi N., Liou R.-F.,
RA   Kikuchi T., Tsai I.J.;
RT   "The Genomic Landscape Of Tree Rot In Phellinus noxius And Its
RT   Hymenochaetales Members.";
RL   bioRxiv 0:0-0(2017).
CC   -!- SIMILARITY: Belongs to the Tango6 family.
CC       {ECO:0000256|ARBA:ARBA00005724}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:PAV21400.1}.
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DR   EMBL; NBII01000003; PAV21400.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A286UPA0; -.
DR   STRING; 2282107.A0A286UPA0; -.
DR   InParanoid; A0A286UPA0; -.
DR   OrthoDB; 1424255at2759; -.
DR   Proteomes; UP000217199; Chromosome 3.
DR   Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR   InterPro; IPR011989; ARM-like.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR019451; Rtp1_C1.
DR   InterPro; IPR039600; TANGO6/Rtp1.
DR   PANTHER; PTHR20959; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 FAMILY MEMBER; 1.
DR   PANTHER; PTHR20959:SF1; TRANSPORT AND GOLGI ORGANIZATION PROTEIN 6 HOMOLOG; 1.
DR   Pfam; PF10363; RTP1_C1; 1.
DR   SUPFAM; SSF48371; ARM repeat; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000217199}.
FT   DOMAIN          753..909
FT                   /note="RNA polymerase II assembly factor Rtp1 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10363"
FT   REGION          640..664
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          987..1035
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        642..660
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1003..1035
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1139 AA;  125441 MW;  91904ADB919AA5F1 CRC64;
     MSSLQQSRTW SETASLSQIL KAESLLNGDK SEKKTTNPSG FVDILLTRLR KFDELIDGTE
     RYRVLDLENL KIDTAFASLY VLERVHNILS EHDTNTSAAP LIGTKDMAQL RTTLSVVYGW
     GTELLLKRIL GSLPNKSPPR VPPGAQIIDL TSTHENYELL LNIINRLLVI VFPDEGSQSK
     TTFVTASILS RDFSNLLRSC ICLAWLPKGV DNRVPNAGSL KPYVERLLSR VPPSLAIASL
     GQILSKPGTM PKYAAKTCSI LLSLQLQRPA GVAGLLSATF GEDPTETDAP LAKLESVAKI
     MNVPPNNIPH EIYYAMIMPR LMYLLSPSME KKTPPTHKRA AAFALSRMIL ASLEAEDPTV
     DIRQLIINWS LLDAFRTQDR KTVLPQSDVH EKMEKAHEIV LTSGSFLPTS AILTLSTILT
     NTDPSPELIS TLVQPIVPQL YSLYEHLQNS KAVDPVLLET TEGLLSTWAR AATRSEAVEI
     LWEIIDGEAW DWDVGEDGDL CITQRTSELP SLTLSQLADL QEGKVDDEEE ENTLGMKPDP
     LKFAQFLKKI ERDDVSSAIY LKTIDAQVKS DTTDNPLRKL KLLKLSMQIS THVDKSIPED
     SPLKKPDVMR MLMFIKLSLD QDKTIKKAGT NQKLSLESLR LVSDDDEDDD EGDSDDEDLA
     PGLEGIDRRE HLSVTAINLL LALLQENSDL SPRTVPLLNE IYSYLEPLAN SDSDALRPRA
     REARLVLTAR IASSTPTKVS KPTDEEEKPQ EKYQRALKLL QDPLLPVRAH GLLLLRELVS
     PAKRVSSRSQ EKPGNLHSGA GAKHGVVMSV AQGAQVAPPS VDQTLVPSIL SIFLQSIQDE
     DSYIFLNSVQ GLAAMVDGFG KEVLRGLISE YAKGPSGTSN SSETMPVREL DMRIRVGEAL
     GQVIRRCGSA LGNYVDILVP PIFSIVRGVH FPTTLRTSAV SLLATAVDTY ILALSMYAAD
     LLTAMVDLIQ VESVAAQSKA KLENKGIDTE NEAGASSSES NRKVTKVGEK ISNGKQDTKG
     KRVESANGLK DRASLDNENI KDEEDIYQNT MDSQPTSSNP KFPPLRRAAL HLLSLFARAM
     TKQIYDHNEV PIDISGLVLR RGKTTMEYIS VTDVDDVVRV MARETGEQLE QLQKALVGL
//