ID A0A287D8V7_ICTTR Unreviewed; 663 AA.
AC A0A287D8V7;
DT 22-NOV-2017, integrated into UniProtKB/TrEMBL.
DT 22-NOV-2017, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=ClpB homolog, mitochondrial AAA ATPase chaperonin {ECO:0000313|Ensembl:ENSSTOP00000029941.1};
GN Name=CLPB {ECO:0000313|Ensembl:ENSSTOP00000029941.1};
OS Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus
OS tridecemlineatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae;
OC Xerinae; Marmotini; Ictidomys.
OX NCBI_TaxID=43179 {ECO:0000313|Ensembl:ENSSTOP00000029941.1, ECO:0000313|Proteomes:UP000005215};
RN [1] {ECO:0000313|Proteomes:UP000005215}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG The Broad Institute Genome Assembly & Analysis Group;
RG Computational R&D Group;
RG and Sequencing Platform;
RA Di Palma F., Alfoldi J., Johnson J., Berlin A., Gnerre S., Jaffe D.,
RA MacCallum I., Young S., Walker B.J., Lindblad-Toh K.;
RT "The Draft Genome of Spermophilus tridecemlineatus.";
RL Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSSTOP00000029941.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (JUL-2023) to UniProtKB.
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DR EMBL; AGTP01028809; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; AGTP01028810; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; A0A287D8V7; -.
DR Ensembl; ENSSTOT00000030923.1; ENSSTOP00000029941.1; ENSSTOG00000004769.3.
DR GeneTree; ENSGT00390000012961; -.
DR Proteomes; UP000005215; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF93; CASEINOLYTIC PEPTIDASE B PROTEIN HOMOLOG; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF12796; Ank_2; 2.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00248; ANK; 3.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 2.
DR PROSITE; PS50088; ANK_REPEAT; 3.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|PROSITE-ProRule:PRU00023};
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000005215}.
FT REPEAT 134..166
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 167..199
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT REPEAT 236..268
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 344..483
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 527..616
FT /note="Clp ATPase C-terminal"
FT /evidence="ECO:0000259|SMART:SM01086"
SQ SEQUENCE 663 AA; 73909 MW; 862E1A211E38EAFA CRC64;
MMLGFLVLRR TAPAPQLLLR LLRSATLQSH GGVSGRSVTT RGRGEPQWLR AAAGGRPGAS
SALPLGRGAA TWGRRGGCTE NQLLSAAPCG RLPIPEETLP GQDSWKGVSN RAGLGMWALA
TALVVHCYSK SSSNKDAALM EAARANNVQE VSRLLSEGAD VNTRHKLGWT ALMVAAINRN
DSVVQVLLAA GADPNLGDDF SSVYKTAKDQ GIHSLEVLVT REDDFNNRLN NRASFKGCTA
LHYAVLADDY RTVKELLDGG ANPLQRNEMG HTPLDYAREG EVMKLLRTSE TKYQEKQRKR
EAEERRRFPL EQRLKEHIIG QESAIATVGA AIRRKENGWY DEEHPLVFLF LGSSGIGKTE
LAKQTAKYMH KDAKKVAKFI GSPPGYIGHE EGGQLTKKLK QCPNAVVLFD EVDKAHPDVL
TIMLQLFDEG RLTDGKGKTI DCKDAIFIMT SNVASDEIAQ HALQLRQEAL EMSRNRIAEN
LGDVQISDKI TISKNFKENV IRPILKAHFR RDEFLGRINE IVYFLPFCHS ELIQLVNKEL
NFWAKRAKQR HNITLLWDRE VADVLVDGYN VHYGARSIKH EVERRVVNQL AAAYEQDLLP
GGCTLRITVE DSDKQLLKSP DLPSPQTEKR PPKLRLEIID KDSKTHKLDI RAPLHPEKVC
YTI
//