ID A0A291JIN2_9STAP Unreviewed; 539 AA.
AC A0A291JIN2;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520};
DE EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520};
GN Name=araB {ECO:0000256|HAMAP-Rule:MF_00520};
GN ORFNames=BJD96_03145 {ECO:0000313|EMBL:ATH59405.1};
OS Staphylococcus nepalensis.
OC Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae;
OC Staphylococcus.
OX NCBI_TaxID=214473 {ECO:0000313|EMBL:ATH59405.1, ECO:0000313|Proteomes:UP000217956};
RN [1] {ECO:0000313|EMBL:ATH59405.1, ECO:0000313|Proteomes:UP000217956}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JS1 {ECO:0000313|EMBL:ATH59405.1,
RC ECO:0000313|Proteomes:UP000217956};
RA Nam Y.-D., Kang J., Chung W.-H.;
RT "Complete genome sequence of Staphylococcus nepalensis JS1.";
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + D-ribulose = ADP + D-ribulose 5-phosphate + H(+);
CC Xref=Rhea:RHEA:17601, ChEBI:CHEBI:15378, ChEBI:CHEBI:17173,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:58121, ChEBI:CHEBI:456216;
CC EC=2.7.1.16; Evidence={ECO:0000256|HAMAP-Rule:MF_00520};
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-ribulose = ADP + H(+) + L-ribulose 5-phosphate;
CC Xref=Rhea:RHEA:22072, ChEBI:CHEBI:15378, ChEBI:CHEBI:16880,
CC ChEBI:CHEBI:30616, ChEBI:CHEBI:58226, ChEBI:CHEBI:456216;
CC EC=2.7.1.16; Evidence={ECO:0000256|HAMAP-Rule:MF_00520};
CC -!- PATHWAY: Carbohydrate degradation; L-arabinose degradation via L-
CC ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route):
CC step 2/3. {ECO:0000256|HAMAP-Rule:MF_00520}.
CC -!- SIMILARITY: Belongs to the ribulokinase family. {ECO:0000256|HAMAP-
CC Rule:MF_00520}.
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DR EMBL; CP017460; ATH59405.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A291JIN2; -.
DR KEGG; snl:BJD96_03145; -.
DR UniPathway; UPA00145; UER00566.
DR Proteomes; UP000217956; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0019150; F:D-ribulokinase activity; IEA:RHEA.
DR GO; GO:0008741; F:ribulokinase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0019569; P:L-arabinose catabolic process to xylulose 5-phosphate; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.420.40; -; 2.
DR HAMAP; MF_00520; Ribulokinase; 1.
DR InterPro; IPR043129; ATPase_NBD.
DR InterPro; IPR000577; Carb_kinase_FGGY.
DR InterPro; IPR018485; FGGY_C.
DR InterPro; IPR018484; FGGY_N.
DR InterPro; IPR005929; Ribulokinase.
DR PANTHER; PTHR43435:SF4; FGGY CARBOHYDRATE KINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR43435; RIBULOKINASE; 1.
DR Pfam; PF02782; FGGY_C; 1.
DR Pfam; PF00370; FGGY_N; 1.
DR PIRSF; PIRSF000538; GlpK; 1.
DR SUPFAM; SSF53067; Actin-like ATPase domain; 2.
PE 3: Inferred from homology;
KW Arabinose catabolism {ECO:0000256|ARBA:ARBA00022935, ECO:0000256|HAMAP-
KW Rule:MF_00520}; ATP-binding {ECO:0000256|HAMAP-Rule:MF_00520};
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023277, ECO:0000256|HAMAP-
KW Rule:MF_00520};
KW Kinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000313|EMBL:ATH59405.1};
KW Nucleotide-binding {ECO:0000256|HAMAP-Rule:MF_00520};
KW Transferase {ECO:0000256|HAMAP-Rule:MF_00520}.
FT DOMAIN 3..275
FT /note="Carbohydrate kinase FGGY N-terminal"
FT /evidence="ECO:0000259|Pfam:PF00370"
FT DOMAIN 287..479
FT /note="Carbohydrate kinase FGGY C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02782"
SQ SEQUENCE 539 AA; 59420 MW; 71F6220F0867394E CRC64;
MSYSIGIDYG TASGRVFLVD TSNGEIISTY IKAYPHGTIS GSLNGRDLPH NYFLQHAEDY
TKILEEGVQH VLKDGNVDPS SIIGIGVDFT SCTIVFLDND FKPLHTHENL KDNPHAYVKL
WKHHGAQEEA TFMKEVSDNH NVGWLDFYGH SVNSEWMIPK ILEVKHKAPE ILAQSAYIME
AGDYIVSLLT NKNIRSNCGI GFKGFYSEKD GFNYAFFEAV DPELPAIIKN KCEAPVVNIG
DSAGNLATYY QKLWGLTEHV QISPYIIDAH SGVLGVGAIE QGEFTPVIGT STCHLMLDPK
QVSIPAITGS VKDAIIPGLY AYEAGQPAVG DLFNYSASLA PKHIVDQAEQ QGISTLEHLE
NLASDIPIHK QHVTILDWHN GNRSILSDSN LTGSIFGLTL QTPFAMIHRA CIEATAFGTK
MIMQQFEKNH IPVNTVYAAG GIPIKSKLLV DIYANVLNKD VVVMDSSNAT ALGAAMLGAN
VGGAYQSLKE TVHHMKQPVY YRLQPDSEKV QQYEKLFQRY KALHDLLGKS YAALSYREN
//