ID A0A292YCW0_9BACL Unreviewed; 487 AA.
AC A0A292YCW0;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:GAX89552.1};
GN ORFNames=EFBL_1176 {ECO:0000313|EMBL:GAX89552.1};
OS Effusibacillus lacus.
OC Bacteria; Bacillota; Bacilli; Bacillales; Alicyclobacillaceae;
OC Effusibacillus.
OX NCBI_TaxID=1348429 {ECO:0000313|EMBL:GAX89552.1, ECO:0000313|Proteomes:UP000217785};
RN [1] {ECO:0000313|Proteomes:UP000217785}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=skLN1 {ECO:0000313|Proteomes:UP000217785};
RA Watanabe M., Kojima H., Fukui M.;
RT "Draft genome sequence of Effusibacillus lacus strain skLN1.";
RL Submitted (JUL-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAX89552.1}.
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DR EMBL; BDUF01000023; GAX89552.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A292YCW0; -.
DR Proteomes; UP000217785; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF120; L-LYSINE AMINOMUTASE REGULATOR; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000217785};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..65
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 157..385
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 487 AA; 54189 MW; 7C71AD61A8DD1830 CRC64;
MEASAANTLE MLHAILGSID EGIHAVNRDG ITVFYNEVAG KLDGLVPEEV IGKHVLDVFP
SLGPDTSTLL QVLATGKPVD HVKQTYTNVH GKAVHTVNST MPIFSRGQLI GALEVAKDLT
QVKELAEKLI DLQASLISQR KAKPRQKLEA RYTFDDIITC NPRMIELKEL AARASSTDSS
VLVCGETGTG KELFVQSIHN FSLRRNRPFI AQNCAAMPAS LLEGLLFGTV KGSFTGAENR
PGLFELADGG TLFLDEINSM PLELQVKLLR VLQEGYVRRI GDTKVTPVNV RVLAATNSDP
LEAIQKGLLR ADLYYRLNVV SLHLPRLAER KEDIRLLTRH FLELYNERFH KRVDRLTPEV
ERCFQLYHWP GNVRELQHAI ESAMNLVRED TIGIELIPPQ IAQEAGVQRK HAAGSDGSGN
STAKGLGVLE EFEASGLSLR EYLDRVERTI IERWLERTKG NVVQAAKRLG MPRQTLQYRV
GRGRNKE
//
