ID A0A2A2ECV2_9BIFI Unreviewed; 375 AA.
AC A0A2A2ECV2;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Transposase {ECO:0000313|EMBL:PAU66746.1};
DE Flags: Fragment;
GN ORFNames=B1400_1820 {ECO:0000313|EMBL:PAU66746.1};
OS Bifidobacterium italicum.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=1960968 {ECO:0000313|EMBL:PAU66746.1, ECO:0000313|Proteomes:UP000217986};
RN [1] {ECO:0000313|EMBL:PAU66746.1, ECO:0000313|Proteomes:UP000217986}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=70 {ECO:0000313|EMBL:PAU66746.1,
RC ECO:0000313|Proteomes:UP000217986};
RX PubMed=28837128; DOI=10.1038/ismej.2017.138;
RA Milani C., Mangifesta M., Mancabelli L., Lugli G.A., James K., Duranti S.,
RA Turroni F., Ferrario C., Ossiprandi M.C., van Sinderen D., Ventura M.;
RT "Unveiling bifidobacterial biogeography across the mammalian branch of the
RT tree of life.";
RL ISME J. 11:2834-2847(2017).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PAU66746.1}.
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DR EMBL; MVOG01000070; PAU66746.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2A2ECV2; -.
DR OrthoDB; 6230307at2; -.
DR Proteomes; UP000217986; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR NCBIfam; NF038280; IS607_TnpB; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
PE 3: Inferred from homology;
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 137..245
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 257..325
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT REGION 332..375
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 337..352
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 353..367
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:PAU66746.1"
FT NON_TER 375
FT /evidence="ECO:0000313|EMBL:PAU66746.1"
SQ SEQUENCE 375 AA; 41981 MW; B636478042F06E48 CRC64;
KADWSMYAMR RWWNEWKNEI APWWAEYSKE AYNSAFESLA AALKNHFDSR TGRRKGRRMG
WPRFKSKRRA TPRFAYTTGS FGLVEGDPKR LKLPRVGRVH CMEDIARRVG AAKVVRMSVS
KRAGRWYASL TVERDAPTVP AAPGGGSVGV DLGVRTLAAL SDGTTIANPR HMGKSLRRLA
RAQRTLSRRE KGSNRWRKAG ARVQRIHARI AAQRRDGLHK LTDMLTRAYR DISIEDLNVE
GMVRNHRLAR AVSDCGFAEL RRQLAYKSAR TGAAVHIVDR WYPSSKTCSN CGTVKAKLSL
NERTYRCDAC GLRIDRDLNA AINIMVAGSA PETLNARGGD ARHDRREPAA QTPTKREPSS
QNNGMRLGAG PGNEA
//
