ID A0A2A2EZD0_9GAMM Unreviewed; 477 AA.
AC A0A2A2EZD0;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Excinuclease cho {ECO:0000256|ARBA:ARBA00040756};
DE AltName: Full=Endonuclease cho {ECO:0000256|ARBA:ARBA00042732};
DE AltName: Full=UvrC homolog protein {ECO:0000256|ARBA:ARBA00042138};
GN ORFNames=CK501_14920 {ECO:0000313|EMBL:PAU77745.1};
OS Halovibrio salipaludis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Halomonadaceae; Halovibrio.
OX NCBI_TaxID=2032626 {ECO:0000313|EMBL:PAU77745.1, ECO:0000313|Proteomes:UP000218896};
RN [1] {ECO:0000313|EMBL:PAU77745.1, ECO:0000313|Proteomes:UP000218896}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YL5-2 {ECO:0000313|EMBL:PAU77745.1,
RC ECO:0000313|Proteomes:UP000218896};
RA Dong X., Zhang G.;
RT "Halovibrio sewagensis sp. nov., isolated from wastewater of high
RT salinity.";
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PAU77745.1}.
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DR EMBL; NSKD01000009; PAU77745.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2A2EZD0; -.
DR OrthoDB; 9803913at2; -.
DR Proteomes; UP000218896; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR CDD; cd10434; GIY-YIG_UvrC_Cho; 1.
DR Gene3D; 3.40.1440.10; GIY-YIG endonuclease; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR000305; GIY-YIG_endonuc.
DR InterPro; IPR035901; GIY-YIG_endonuc_sf.
DR InterPro; IPR047296; GIY-YIG_UvrC_Cho.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30562:SF10; EXCINUCLEASE CHO; 1.
DR PANTHER; PTHR30562; UVRC/OXIDOREDUCTASE; 1.
DR Pfam; PF01541; GIY-YIG; 1.
DR Pfam; PF00929; RNase_T; 1.
DR SMART; SM00479; EXOIII; 1.
DR SMART; SM00465; GIYc; 1.
DR SUPFAM; SSF82771; GIY-YIG endonuclease; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50164; GIY_YIG; 1.
PE 4: Predicted;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000218896}.
FT DOMAIN 198..276
FT /note="GIY-YIG"
FT /evidence="ECO:0000259|PROSITE:PS50164"
SQ SEQUENCE 477 AA; 53931 MW; 07AB33179033D345 CRC64;
MVKLAFIDLE TTGGSASGDR VTEIGLRLWE DGEVIEEWQT LVNPEQTIPH YIESLTGITN
AMVAEAPRFE EVAETFREKV GDAVFVAHNA RFDYGFIKAE FRRLGKAFAA PVLCTVKLSR
RLYPEYRRHN MDALIERHGL EPGPRHRAMG DVESMFQFFE RIRSEQGVEP VAETIQALLK
RPSIPSHISP DILDELPDTP GVYRFYGEND VLLYVGKSTN IRQRVASHFS GDHNTSKGVQ
LSQSMRRVDW TETAGELGAL LLELHQIKTL KPLYNRRSRA AKRLVSIALS ETEAGYLGAE
LSWRIDPASL GQYHGLFRSK KDAQKALQGT AQKNELCNRM LGLESGPGPC FQRRLGRCRG
ACEGEEDVTR YNLRTQIAFH SMQLTTWPWE GAIGVVESNE AMGRTDIHVL YNWAHLATVH
SEAALRELEP GREALAFDLD SYKLLVKYVM APSHRLRVIE CPWVPRPEVV WPSGYQD
//
