ID A0A2A2J874_9BILA Unreviewed; 874 AA.
AC A0A2A2J874;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 22-FEB-2023, entry version 16.
DE RecName: Full=Nematode cuticle collagen N-terminal domain-containing protein {ECO:0000259|SMART:SM01088};
GN ORFNames=WR25_04423 {ECO:0000313|EMBL:PAV57978.1};
OS Diploscapter pachys.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Diploscapter.
OX NCBI_TaxID=2018661 {ECO:0000313|EMBL:PAV57978.1, ECO:0000313|Proteomes:UP000218231};
RN [1] {ECO:0000313|EMBL:PAV57978.1, ECO:0000313|Proteomes:UP000218231}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PF1309 {ECO:0000313|EMBL:PAV57978.1};
RA Fradin H., Zegar C., Gutwein M., Lucas J., Kovtun M., Corcoran D.,
RA Baugh L.R., Kiontke K., Gunsalus K., Fitch D.H., Piano F.;
RT "Genome architecture and evolution of a unichromosomal asexual nematode.";
RL Curr. Biol. 0:0-0(2017).
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the RED family. {ECO:0000256|ARBA:ARBA00006660}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PAV57978.1}.
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DR EMBL; LIAE01010609; PAV57978.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2A2J874; -.
DR STRING; 2018661.A0A2A2J874; -.
DR Proteomes; UP000218231; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR Gene3D; 1.20.5.320; 6-Phosphogluconate Dehydrogenase, domain 3; 1.
DR InterPro; IPR002486; Col_cuticle_N.
DR InterPro; IPR039896; Red-like.
DR InterPro; IPR012492; RED_C.
DR InterPro; IPR012916; RED_N.
DR PANTHER; PTHR12765:SF5; PROTEIN RED; 1.
DR PANTHER; PTHR12765; RED PROTEIN IK FACTOR CYTOKINE IK; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR Pfam; PF07807; RED_C; 1.
DR Pfam; PF07808; RED_N; 1.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 3: Inferred from homology;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000218231};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 7..58
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 107..137
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 149..183
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 201..274
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 360..408
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 608..755
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 775..796
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 107..124
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 240..274
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 392..408
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 633..755
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 781..796
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 874 AA; 99135 MW; 6844178B0BDD1B33 CRC64;
MFEEKLLVGI ASTCSLIAVI TCLIVIPTIY KEINDIHDEV INSVNVFRVE TDTAWADMMD
VQVLVTPPSK PRENPFASVF RQKRQYYGGL PSWCQCNAPV ARCPSGPPGP PGLPGQPGNP
GPPGQPGADS HDFYPAISCP APPNDCKRCP RGDTLEPQDS QVSEDTAAHQ DPDNPDAVSS
KAKIVRSNDA YNLIPAGLAG RSGARVAGRP GRAGANQEST EASQESQDIP EDQEKMVCQE
SQDSQESQDQ TRLTAPAQQD PATTRPGDTG NTKRWFSPHT NCILSETCAY PGGCRQFFAD
QHQSARIRVG RQFLSDNCVF DSIGQIVYSK LSLTRYPTMA DGSTNLRNED FRKLLAAPRS
AGASSKASEP ASAKSDVAFQ RKQKVKPEKK KSRPFKSSAK EKLEPDEEEA KLKEILKNYR
DRAAERRNKN DDDMDEATKL LAAYHSVPGD ARGTRDKANL RKQIIEESKF LGGDLAHTHL
VKGLDYSLLN KVRSEMQKSH IERVNDELED ALEKGEEPKV EVKTENKMVQ RINSTLFKND
LPEKNAMFAK GRMAYVVSFD DEEGEVPTTL LRSLHDLPRH ESNASINANN MLISKLTQVL
AYLRADNKKK KRVDVPEEET RQQANSSIFE NEEEYVPSKH RDKRDDKDKR TSDRDRDRDA
PRKDKERDYF GDKGRREKED RRDRRDRRSR SRSREVDKSR ERERDRDHRD RDRDRDRERD
RDRKKDGDRN KKDDKQRRLQ EEQEREKKLE EKLEKKMKAT ANTGYDECYP GGFAEMGGAS
DDEEDFSKMD PGNKKGVIKR WDFSTEEEFE SYQASREANP RAAYQFGIKA GDGRKTRKNA
DPNKKLEREL NQINKLIEKR KTGGDDGFVF LSKL
//