ID A0A2A2LEC6_9BILA Unreviewed; 1030 AA.
AC A0A2A2LEC6;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 12.
DE RecName: Full=SSD domain-containing protein {ECO:0000259|PROSITE:PS50156};
GN ORFNames=WR25_22041 {ECO:0000313|EMBL:PAV84529.1};
OS Diploscapter pachys.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Diploscapter.
OX NCBI_TaxID=2018661 {ECO:0000313|EMBL:PAV84529.1, ECO:0000313|Proteomes:UP000218231};
RN [1] {ECO:0000313|EMBL:PAV84529.1, ECO:0000313|Proteomes:UP000218231}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PF1309 {ECO:0000313|EMBL:PAV84529.1};
RA Fradin H., Zegar C., Gutwein M., Lucas J., Kovtun M., Corcoran D.,
RA Baugh L.R., Kiontke K., Gunsalus K., Fitch D.H., Piano F.;
RT "Genome architecture and evolution of a unichromosomal asexual nematode.";
RL Curr. Biol. 0:0-0(2017).
CC -!- SIMILARITY: Belongs to the patched family.
CC {ECO:0000256|ARBA:ARBA00005585}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PAV84529.1}.
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DR EMBL; LIAE01006839; PAV84529.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2A2LEC6; -.
DR STRING; 2018661.A0A2A2LEC6; -.
DR Proteomes; UP000218231; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 1.20.1640.10; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR InterPro; IPR003392; Ptc/Disp.
DR InterPro; IPR000731; SSD.
DR PANTHER; PTHR10796; PATCHED-RELATED; 1.
DR PANTHER; PTHR10796:SF181; SSD DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF02460; Patched; 1.
DR SUPFAM; SSF82866; Multidrug efflux transporter AcrB transmembrane domain; 2.
DR PROSITE; PS50156; SSD; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000218231};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 25..44
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 296..317
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 323..346
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 353..376
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 427..450
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 520..543
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 722..746
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 753..773
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 779..797
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 818..843
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 855..879
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 293..450
FT /note="SSD"
FT /evidence="ECO:0000259|PROSITE:PS50156"
FT REGION 955..1030
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 955..991
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1012..1030
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1030 AA; 114964 MW; 6B5A0D5C063E902A CRC64;
MVRFDCVEKR FAKLFGNYST IVVRYPLPFF ILPILLSCGL GIGLTRHKQA FMKDELELYT
PTDAQARREL KQLDTLFHIN DSDPFYATRR YDIRRSGYII VTQRDDEDIL NPLVMHAAMQ
LWSVVQALTV EDQEDRHINY PSICVKFPIP PEFSKVLHSL FSPNITTPDE ICVSNPLVEM
FKLLLVSDRS FLNRSIDEMT LGQISDAVQF DSGGMRHLLG GITLDSEKRI AGAKAIMLPY
ALRHSSQVED WLAEKWELRL ADFLLQYDSP VIRASWWTYE TLAAESARDR NTLIRMLIPC
FCAVSIYTVI CCCVLSWRRS RPWLAIGGVI SAAMACESAV GLLLLLGYGM TSVAYSMPFI
VFSVGVDNVF ILLSAWRATP TNESMERRMH ETFADAAVSI TVTSLTDLIS FAVGCATPFP
SVQMFCMYAV VAVIFTYIYQ LTFFAAVMVY TCRREINNRN CVTFTKLEKD KGRHSFEDSL
QPEELGGNSW TLEKKVSVGD RSFEKNHVLA RFFRTTYADV LLNPLFRIII LALFAAYLGI
SIWGCTKVKL GLEPNDLLPD NSYGKRSLQM AEKYFSDYGS YLHVWMYNLS TTDIGNRRIW
SVLEKEIELY EHTEFTGSSD SWLRTFLSFV KQSGLLITTD NFVYILKNVF LSQPQFSKYA
RDVVLDTSGT LLDASRIPVQ LRHVGSTNQS RAMHLFRRLA ETSELPTGVY ADFFQFAEQY
NAVLPGTLSS IACAGAAVIA VSLILIPEPV ASLWVSFSIV SINIGILGLM TFWSVRLDFI
SMVTIVMSIG FCVDFAAHIA YNFAKGKDIT ADERMRNALY AVGAPILMSA SSTILGVSFM
ATAESYVFRS FLKTIILVVV LGVLHGLVIL PVLLTLFYCG DSAASKKNAE RLKSVHENLA
KKYPVLSAIS SSSAAVNGNG PPPSFMSGSL AAELYSLPPS TCEYSLSSLE YSRSAGSSYS
SRPPDYEETQ QQTGGGMPIG MGQTQQLHNS GGMLFPMRAK LKPKSKRSGS GSEESESPPS
LDYFYHTPSG
//