ID A0A2A2SAF1_9SPHI Unreviewed; 468 AA.
AC A0A2A2SAF1;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=tRNA nucleotidyltransferase {ECO:0000313|EMBL:PAW95630.1};
GN ORFNames=CKK33_07735 {ECO:0000313|EMBL:PAW95630.1};
OS Mucilaginibacter sp. MD40.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Mucilaginibacter.
OX NCBI_TaxID=2029590 {ECO:0000313|EMBL:PAW95630.1, ECO:0000313|Proteomes:UP000242486};
RN [1] {ECO:0000313|EMBL:PAW95630.1, ECO:0000313|Proteomes:UP000242486}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MD40 {ECO:0000313|EMBL:PAW95630.1,
RC ECO:0000313|Proteomes:UP000242486};
RA Wan X., Darris M., Hou S., Donachie S.P.;
RT "Draft genome sequence of Mucilaginibacter sp. MD40, isolated from a
RT biofilm in an air conditioner condensate pipe.";
RL Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- SIMILARITY: Belongs to the tRNA nucleotidyltransferase/poly(A)
CC polymerase family. {ECO:0000256|RuleBase:RU003953}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PAW95630.1}.
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DR EMBL; NRSW01000001; PAW95630.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2A2SAF1; -.
DR OrthoDB; 9805698at2; -.
DR Proteomes; UP000242486; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0031123; P:RNA 3'-end processing; IEA:UniProt.
DR GO; GO:0042245; P:RNA repair; IEA:UniProtKB-KW.
DR GO; GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
DR CDD; cd00077; HDc; 1.
DR CDD; cd05398; NT_ClassII-CCAase; 1.
DR Gene3D; 1.10.246.80; -; 1.
DR Gene3D; 3.30.460.10; Beta Polymerase, domain 2; 1.
DR Gene3D; 1.10.3090.10; cca-adding enzyme, domain 2; 1.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR006675; HDIG_dom.
DR InterPro; IPR043519; NT_sf.
DR InterPro; IPR002646; PolA_pol_head_dom.
DR InterPro; IPR032828; PolyA_RNA-bd.
DR NCBIfam; TIGR00277; HDIG; 1.
DR PANTHER; PTHR47545; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR PANTHER; PTHR47545:SF1; MULTIFUNCTIONAL CCA PROTEIN; 1.
DR Pfam; PF01966; HD; 1.
DR Pfam; PF01743; PolyA_pol; 1.
DR Pfam; PF12627; PolyA_pol_RNAbd; 1.
DR SMART; SM00471; HDc; 1.
DR SUPFAM; SSF81301; Nucleotidyltransferase; 1.
DR SUPFAM; SSF81891; Poly A polymerase C-terminal region-like; 1.
PE 3: Inferred from homology;
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000242486};
KW RNA repair {ECO:0000256|ARBA:ARBA00022800};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|RuleBase:RU003953};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU003953};
KW tRNA processing {ECO:0000256|ARBA:ARBA00022694}.
FT DOMAIN 249..373
FT /note="HD/PDEase"
FT /evidence="ECO:0000259|SMART:SM00471"
SQ SEQUENCE 468 AA; 53135 MW; 1AE1E1D38EC02237 CRC64;
MKQHLQHPVF SVISKLAAEK NVQAFAIGGY VRDIFLNRPS KDIDVVVLGN GIEFAEAVAA
SLNVKVSVFK NFGTAMLRYQ DVEVEFVGAR KESYRSDSRK PIVENGTLED DQKRRDFTIN
ALAISLHPDN YGELIDPFEG ITDLNNKLMR TPLNPVETFS DDPLRMMRAI RFASQLGFRI
DDEAVAAIKS NLQRIKIVSQ ERITDELNKI ILSPLPSVGF NYLFDTGLLH IIFPQMAALY
GVEVINGKGH KDNFYHTLQV LDNICETTGD LWLRWAAILH DIAKPATKRF EQGHGWTFHG
HEDKGARMVP KIFTQLKLPL NEKMKFVQKL VQLHLRPIVL SQSVVTDSAV RRLLFEAGDD
IEALMLLCKA DVTTKNEYKV KKYRQNFELV QQKLKDVEER DNIRNWQPPV TGLDIMQLFG
ISEGREVGII KNKIREAILE GEIPNDREAA IKYTIEKGKE IGLKVVAN
//
