ID A0A2A7MED1_9CLOT Unreviewed; 382 AA.
AC A0A2A7MED1;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=IS3 family transposase {ECO:0000313|EMBL:PEG29783.1};
GN ORFNames=CQ394_14100 {ECO:0000313|EMBL:PEG29783.1};
OS Clostridium neonatale.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=137838 {ECO:0000313|EMBL:PEG29783.1, ECO:0000313|Proteomes:UP000220840};
RN [1] {ECO:0000313|EMBL:PEG29783.1, ECO:0000313|Proteomes:UP000220840}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LCDC99A005 {ECO:0000313|EMBL:PEG29783.1,
RC ECO:0000313|Proteomes:UP000220840};
RA Bernard K., Burdz T., Wiebe D., Balcewich B., Alfa M., Bernier A.-M.;
RT "Effective Description of Clostridium neonatale sp. nov. linked to
RT necrotizing enterocolitis in neonates and a clarification of species
RT assignable to the genus Clostridium (Prazmowski 1880) emend. Lawson and
RT Rainey 2016.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PEG29783.1}.
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DR EMBL; PDCJ01000002; PEG29783.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2A7MED1; -.
DR STRING; 137838.GCA_001458595_01050; -.
DR OrthoDB; 568465at2; -.
DR Proteomes; UP000220840; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR025948; HTH-like_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR048020; Transpos_IS3.
DR InterPro; IPR002514; Transposase_8.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; NF033516; transpos_IS3; 1.
DR PANTHER; PTHR46889; TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED; 1.
DR PANTHER; PTHR46889:SF1; TRANSPOSASE INSO FOR INSERTION SEQUENCE ELEMENT IS911B-RELATED; 1.
DR Pfam; PF13276; HTH_21; 1.
DR Pfam; PF01527; HTH_Tnp_1; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF13333; rve_2; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000220840};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 212..379
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 382 AA; 44215 MW; 907EAE189C0838D9 CRC64;
MGKGRRYDQE YKDMIVDLFK SGISLAELSS EYGIARSTIN GWIKDVKEIK VDENEVMTLK
EVKELKKEMV RIKEENEILK KGYGHICNKK LDEVIEFIDS NKTNYDIKTM CSVLGVARST
YYKSLDKTKS IRKLENEALK AAIIRIYKAN KGIYGAPRIH HILGTEGFNV SLKRVQRRMK
DLDLCAITVK KYKPHSNKKV VEGLENVLKR DFTTTSINEK WVGDITYIHT IKDGWCYLAS
VLDLHSKKII CYAFGKRMTN DLVVKALKNA HYNQSPDKNK QLIFHTDLGS QYTSNDLKEI
CKKLNITQSF SKKGCPYDNA CIESFHSSIK KEEIYRNTYR TFEEANIAIF KYIEAWYNKK
RLHSSINYMT PDQCELLARS AA
//
