ID A0A2A7MJ62_9CLOT Unreviewed; 162 AA.
AC A0A2A7MJ62;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE SubName: Full=CarD family transcriptional regulator {ECO:0000313|EMBL:PEG31361.1};
DE SubName: Full=RNA polymerase-binding transcription factor CarD {ECO:0000313|EMBL:VCT84801.1};
DE SubName: Full=Transcriptional regulator, CarD-like/TRCF domain {ECO:0000313|EMBL:CAG9707304.1};
GN Name=carD_3 {ECO:0000313|EMBL:VCT84801.1};
GN ORFNames=CNEO_42949 {ECO:0000313|EMBL:CAG9707304.1},
GN CNEONATNEC25_02402 {ECO:0000313|EMBL:VCT84801.1}, CQ394_06535
GN {ECO:0000313|EMBL:PEG31361.1};
OS Clostridium neonatale.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=137838 {ECO:0000313|EMBL:PEG31361.1, ECO:0000313|Proteomes:UP000220840};
RN [1] {ECO:0000313|EMBL:PEG31361.1, ECO:0000313|Proteomes:UP000220840}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LCDC99A005 {ECO:0000313|EMBL:PEG31361.1,
RC ECO:0000313|Proteomes:UP000220840};
RA Bernard K., Burdz T., Wiebe D., Balcewich B., Alfa M., Bernier A.-M.;
RT "Effective Description of Clostridium neonatale sp. nov. linked to
RT necrotizing enterocolitis in neonates and a clarification of species
RT assignable to the genus Clostridium (Prazmowski 1880) emend. Lawson and
RT Rainey 2016.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:VCT84801.1, ECO:0000313|Proteomes:UP000431451}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NEC25 {ECO:0000313|EMBL:VCT84801.1,
RC ECO:0000313|Proteomes:UP000431451};
RG IHU Genomes;
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAG9707304.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CC3_PB {ECO:0000313|EMBL:CAG9707304.1};
RA Mesa V.;
RL Submitted (OCT-2021) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CAKJVE010000004; CAG9707304.1; -; Genomic_DNA.
DR EMBL; PDCJ01000001; PEG31361.1; -; Genomic_DNA.
DR EMBL; UWJD01000002; VCT84801.1; -; Genomic_DNA.
DR RefSeq; WP_058295520.1; NZ_UWJD01000002.1.
DR STRING; 137838.GCA_001458595_02776; -.
DR GeneID; 68877801; -.
DR OrthoDB; 9786074at2; -.
DR Proteomes; UP000220840; Unassembled WGS sequence.
DR Proteomes; UP000431451; Unassembled WGS sequence.
DR Proteomes; UP000789738; Unassembled WGS sequence.
DR Gene3D; 2.40.10.170; -; 1.
DR Gene3D; 1.20.58.1290; CarD-like, C-terminal domain; 1.
DR InterPro; IPR003711; CarD-like/TRCF_RID.
DR InterPro; IPR036101; CarD-like/TRCF_RID_sf.
DR InterPro; IPR042215; CarD-like_C.
DR InterPro; IPR048792; CarD_C.
DR PANTHER; PTHR38447:SF1; RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR CARD; 1.
DR PANTHER; PTHR38447; TRANSCRIPTION FACTOR YDEB-RELATED; 1.
DR Pfam; PF21095; CarD_C; 1.
DR Pfam; PF02559; CarD_TRCF_RID; 1.
DR SMART; SM01058; CarD_TRCF; 1.
DR SUPFAM; SSF141259; CarD-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000220840}.
FT DOMAIN 1..115
FT /note="CarD-like/TRCF RNAP-interacting"
FT /evidence="ECO:0000259|SMART:SM01058"
SQ SEQUENCE 162 AA; 19025 MW; 65B4706BC538F4A4 CRC64;
MFQIGDVVFY PQHGVGIIDC IEEKEINGET KSYYEFHLIN NPMKIVLPLD KVENFHVRLI
SDTDTIDYIL MDISNRLANF SEFADYNYKD RKEKFIEKMK IGTIENYLEV IYILTKLKIK
HELNSTEGQF LYRSKKIVIE EISIAKNLSK DEAIDLLEYA IS
//
