ID A0A2A7MJP9_9CLOT Unreviewed; 111 AA.
AC A0A2A7MJP9;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=UPF0122 protein CNEONATNEC25_02780 {ECO:0000256|HAMAP-Rule:MF_00245};
GN Name=ylxM {ECO:0000313|EMBL:CAG9706429.1};
GN ORFNames=CNEO_42454 {ECO:0000313|EMBL:CAG9706429.1},
GN CNEONATNEC25_02780 {ECO:0000313|EMBL:VCT85179.1}, CQ394_08915
GN {ECO:0000313|EMBL:PEG31799.1};
OS Clostridium neonatale.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=137838 {ECO:0000313|EMBL:PEG31799.1, ECO:0000313|Proteomes:UP000220840};
RN [1] {ECO:0000313|EMBL:PEG31799.1, ECO:0000313|Proteomes:UP000220840}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LCDC99A005 {ECO:0000313|EMBL:PEG31799.1,
RC ECO:0000313|Proteomes:UP000220840};
RA Bernard K., Burdz T., Wiebe D., Balcewich B., Alfa M., Bernier A.-M.;
RT "Effective Description of Clostridium neonatale sp. nov. linked to
RT necrotizing enterocolitis in neonates and a clarification of species
RT assignable to the genus Clostridium (Prazmowski 1880) emend. Lawson and
RT Rainey 2016.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:VCT85179.1, ECO:0000313|Proteomes:UP000431451}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NEC25 {ECO:0000313|EMBL:VCT85179.1,
RC ECO:0000313|Proteomes:UP000431451};
RG IHU Genomes;
RL Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CAG9706429.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CC3_PB {ECO:0000313|EMBL:CAG9706429.1};
RA Mesa V.;
RL Submitted (OCT-2021) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Might take part in the signal recognition particle (SRP)
CC pathway. This is inferred from the conservation of its genetic
CC proximity to ftsY/ffh. May be a regulatory protein.
CC {ECO:0000256|ARBA:ARBA00024764, ECO:0000256|HAMAP-Rule:MF_00245}.
CC -!- SIMILARITY: Belongs to the UPF0122 family.
CC {ECO:0000256|ARBA:ARBA00008720, ECO:0000256|HAMAP-Rule:MF_00245}.
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DR EMBL; CAKJVE010000004; CAG9706429.1; -; Genomic_DNA.
DR EMBL; PDCJ01000001; PEG31799.1; -; Genomic_DNA.
DR EMBL; UWJD01000002; VCT85179.1; -; Genomic_DNA.
DR RefSeq; WP_058295950.1; NZ_UWJD01000002.1.
DR STRING; 137838.GCA_001458595_03254; -.
DR GeneID; 68878242; -.
DR OrthoDB; 6392at2; -.
DR Proteomes; UP000220840; Unassembled WGS sequence.
DR Proteomes; UP000431451; Unassembled WGS sequence.
DR Proteomes; UP000789738; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR HAMAP; MF_00245; UPF0122; 1.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007394; UPF0122.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR40083; UPF0122 PROTEIN CBO2450/CLC_2298; 1.
DR PANTHER; PTHR40083:SF1; UPF0122 PROTEIN CBO2450_CLC_2298; 1.
DR Pfam; PF04297; UPF0122; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000313|EMBL:PEG31799.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000220840}.
SQ SEQUENCE 111 AA; 13150 MW; 46F981DE43E77C52 CRC64;
MDEKERFEIS LLMDLYGPLL TEKQADIMDL YYNDDLSLAE IAELNKTSRQ AIHDLIKRCY
KQLLSYEGKL NLLQKSIEKN KKIIDFLEDL KINHSIDNGE ILRYKEKLEN L
//
