ID A0A2A8HXH9_9SPHN Unreviewed; 394 AA.
AC A0A2A8HXH9;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE SubName: Full=L,D-transpeptidase {ECO:0000313|EMBL:PEQ13791.1};
GN ORFNames=B2G71_05620 {ECO:0000313|EMBL:PEQ13791.1};
OS Novosphingobium sp. PC22D.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1962403 {ECO:0000313|EMBL:PEQ13791.1, ECO:0000313|Proteomes:UP000220675};
RN [1] {ECO:0000313|EMBL:PEQ13791.1, ECO:0000313|Proteomes:UP000220675}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PC22D {ECO:0000313|EMBL:PEQ13791.1,
RC ECO:0000313|Proteomes:UP000220675};
RA Peterson S.W.;
RL Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Cell wall biogenesis; peptidoglycan biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004752}.
CC -!- SIMILARITY: Belongs to the YkuD family.
CC {ECO:0000256|ARBA:ARBA00005992}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PEQ13791.1}.
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DR EMBL; MWMO01000002; PEQ13791.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2A8HXH9; -.
DR UniPathway; UPA00219; -.
DR Proteomes; UP000220675; Unassembled WGS sequence.
DR GO; GO:0004180; F:carboxypeptidase activity; IEA:UniProt.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-UniPathway.
DR CDD; cd16913; YkuD_like; 1.
DR Gene3D; 2.40.440.10; L,D-transpeptidase catalytic domain-like; 1.
DR InterPro; IPR005490; LD_TPept_cat_dom.
DR InterPro; IPR045380; LD_TPept_scaffold_dom.
DR InterPro; IPR038063; Transpep_catalytic_dom.
DR PANTHER; PTHR41533:SF2; BLR7131 PROTEIN; 1.
DR PANTHER; PTHR41533; L,D-TRANSPEPTIDASE HI_1667-RELATED; 1.
DR Pfam; PF20142; Scaffold; 1.
DR Pfam; PF03734; YkuD; 1.
DR SUPFAM; SSF141523; L,D-transpeptidase catalytic domain-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000220675};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 24..132
FT /note="L,D-transpeptidase scaffold"
FT /evidence="ECO:0000259|Pfam:PF20142"
FT DOMAIN 162..301
FT /note="L,D-transpeptidase catalytic"
FT /evidence="ECO:0000259|Pfam:PF03734"
SQ SEQUENCE 394 AA; 42908 MW; AFD8B21A5FD21D58 CRC64;
MLAYVTLGAT PVAAQSVAGW TRHEADRLKV WAARAPEDAL PALDTTSLDD AIASGDGAAI
DGEATALALR LARWHLLGAV PASRRAGWHI TDTDSSVDLR ERLARALAMN SLDSFFEGLR
PAHRDYAALR RQYGVESDPA RRRTLALNME RWRWMPRVLG SDYILVNAAA FEARLSLQGR
EPSRWRVIVG KRSTPTPIFS AQVTGVILNP WWTVPASIVR EKRGVFPASA GYVRSGGQVR
QKPGPTNALG EMKLDMPNPY TVYMHDTPSK ALFDREVRAF SHGCVRVDHA LDFARTLLAG
TMSREQIDAV VARRVTTTVP LERALPVYIA YFTASASEEG GVAFHPDIYG RDARQGMAEV
TRPAAVASSD PASECGQAEA LALNEAPAAA LVQR
//
