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Database: UniProt
Entry: A0A2A9NZ95_9AGAR
LinkDB: A0A2A9NZ95_9AGAR
Original site: A0A2A9NZ95_9AGAR 
ID   A0A2A9NZ95_9AGAR        Unreviewed;       880 AA.
AC   A0A2A9NZ95;
DT   20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT   20-DEC-2017, sequence version 1.
DT   24-JAN-2024, entry version 18.
DE   RecName: Full=HRDC domain-containing protein {ECO:0000259|PROSITE:PS50967};
GN   ORFNames=AMATHDRAFT_137825 {ECO:0000313|EMBL:PFH53303.1};
OS   Amanita thiersii Skay4041.
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Agaricomycetidae; Agaricales; Pluteineae; Amanitaceae; Amanita.
OX   NCBI_TaxID=703135 {ECO:0000313|EMBL:PFH53303.1, ECO:0000313|Proteomes:UP000242287};
RN   [1] {ECO:0000313|EMBL:PFH53303.1, ECO:0000313|Proteomes:UP000242287}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SKay4041 {ECO:0000313|EMBL:PFH53303.1,
RC   ECO:0000313|Proteomes:UP000242287};
RG   DOE Joint Genome Institute;
RA   Hess J., Skrede I., Wolfe B., LaButti K., Ohm R.A., Grigoriev I.V.,
RA   Pringle A.;
RT   "Transposable element dynamics among asymbiotic and ectomycorrhizal Amanita
RT   fungi.";
RL   Submitted (FEB-2014) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC       {ECO:0000256|ARBA:ARBA00004604}.
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DR   EMBL; KZ301974; PFH53303.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A2A9NZ95; -.
DR   STRING; 703135.A0A2A9NZ95; -.
DR   OrthoDB; 2880475at2759; -.
DR   Proteomes; UP000242287; Unassembled WGS sequence.
DR   GO; GO:0000176; C:nuclear exosome (RNase complex); IEA:InterPro.
DR   GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR   CDD; cd06147; Rrp6p_like_exo; 1.
DR   Gene3D; 1.10.150.80; HRDC domain; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR012588; Exosome-assoc_fac_Rrp6_N.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR045092; Rrp6-like.
DR   PANTHER; PTHR12124:SF47; EXOSOME COMPONENT 10; 1.
DR   PANTHER; PTHR12124; POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   Pfam; PF08066; PMC2NT; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
KW   Exosome {ECO:0000256|ARBA:ARBA00022835};
KW   Reference proteome {ECO:0000313|Proteomes:UP000242287};
KW   rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT   DOMAIN          491..572
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
FT   REGION          825..880
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   880 AA;  98884 MW;  DAE877FAB1F7484C CRC64;
     MDTDPSSFDQ LNKNLQQYAL KATRHALHIP SDVAFHRSMD STLGKDIDAV SVRILALTNS
     LLSLGSNLDL TIEAKGRGQG KSPLENQDDV VDSFHSLVVD PVDRLLERTD MCLDEYLGRT
     KPPAIIINPT ISNKPAKKSM QAFTGHLDPA LQHAAHISKP QQQFKRKPDN SDGPWYPSLF
     HKYNAKVPLG YDYRDPQEQG DEAPIQNHPY RYEIVHFTPP QHMFVSQTSV SPLPLSATPY
     TWVSTLDAFQ AMLSKLRQVQ EIAVDLEHHN YRTYSGFVCL MQLSTRQEDW IVDTLALREE
     LVELNEVFTD PEIVKVFHGA ESDIVWLQQD FNLYVVNLFD TFHASKLLDF PRHGLANLLE
     MYCDIIPDKK YQLADWRIRP LPEEMIQYAR SDTHFLLYIY DCLRNALIDR SRSSSPSGTL
     SSWCSSTPVP ASGTVPSLLL IAISRSRDTS LRTYQKEMYD TICGSGPNGW DTLARKWNKP
     LLLANNDSAI GKVQRSIYYS THAWRDKVAR EEDESIRYVL PNHYLFLLAE QPPSDMATLL
     KAFPSGPPPV IRRRAQELLD VVREALKASS LSALPTDAAN NENNIAASQS SDSIHSETAA
     DEEANCNVQL LQRSVAEIDI WTISDIPKAV NGSSLFKSKS SPVPAPNVKP IASRMSSLFG
     RLVCALWSLL MPSIRFLQDP CRVEPTTRFK DLVSRINSTL VIAPSLTKVC VCELSAELEL
     IPHIKLRINN ATEITVHPQT KAEPVTDMLG VDIEIPFISA AERKPKMSDP RTEDTIVVVG
     QGRMKKRKHK NVALSARANR EIANVSDGTT TDNQEDFDFA AASNILDNNS DNEAEERVTK
     PQKPKKQTQM TKGQFYGEFP APPKASSEFR RGNQSFTFRK
//
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