ID A0A2B4SJF4_STYPI Unreviewed; 1277 AA.
AC A0A2B4SJF4;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 14.
DE SubName: Full=Putative RNA-directed DNA polymerase from transposon BS {ECO:0000313|EMBL:PFX30021.1};
GN Name=RTase {ECO:0000313|EMBL:PFX30021.1};
GN ORFNames=AWC38_SpisGene5231 {ECO:0000313|EMBL:PFX30021.1};
OS Stylophora pistillata (Smooth cauliflower coral).
OC Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia;
OC Astrocoeniina; Pocilloporidae; Stylophora.
OX NCBI_TaxID=50429 {ECO:0000313|EMBL:PFX30021.1, ECO:0000313|Proteomes:UP000225706};
RN [1] {ECO:0000313|Proteomes:UP000225706}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Voolstra C.R., Li Y., Liew Y.J., Baumgarten S., Zoccola D., Flot J.-F.,
RA Tambutte S., Allemand D., Aranda M.;
RT "Comparative analysis of the genomes of Stylophora pistillata and Acropora
RT digitifera provides evidence for extensive differences between species of
RT corals.";
RL bioRxiv 0:0-0(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PFX30021.1}.
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DR EMBL; LSMT01000057; PFX30021.1; -; Genomic_DNA.
DR STRING; 50429.A0A2B4SJF4; -.
DR EnsemblMetazoa; XM_022927596.1; XP_022783331.1; LOC111324103.
DR Proteomes; UP000225706; Unassembled WGS sequence.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR CDD; cd01650; RT_nLTR_like; 1.
DR Gene3D; 1.20.960.40; -; 1.
DR Gene3D; 3.60.10.10; Endonuclease/exonuclease/phosphatase; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR036691; Endo/exonu/phosph_ase_sf.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR39063:SF1; LISH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR39063; ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG; 1.
DR Pfam; PF16045; LisH_2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00667; LisH; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF56219; DNase I-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleotidyltransferase {ECO:0000313|EMBL:PFX30021.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000225706};
KW RNA-directed DNA polymerase {ECO:0000313|EMBL:PFX30021.1};
KW Transferase {ECO:0000313|EMBL:PFX30021.1}.
FT DOMAIN 322..600
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT REGION 1179..1214
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1253..1277
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 854..889
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 929..1087
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 1181..1214
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1277 AA; 146613 MW; 7A33E4A786A3A1FA CRC64;
MSQLRNRLIK ELQETAGKDE LAESHGQSEN TETVCKLAAN SLVADHLKRC NYEYSLSVFM
PESGLQEHKL LTMRDVLVLL KISEGSELYQ NMEVLLDKQG SSNGLLVELL SALGASHYHG
KSSKAVQASL QQLSSIARPP PLLYNNSAAT TVQQQRFYNN SAAKLDVLIL TETFGSSKIP
DSYYMIPGYT LHRKDRIGKK GGGIIAYVNE KVMASRRRDL ELDDLETLWL QICPHKSKRP
ILISGVYRPP SANKDYNESL GTEQSWINAD GKWGXQITPS EVNDYLLSIP THKATGIDGL
GARVLRIAAP EISCSIAKII NHCIETCTFP SQWKIAKVKP LFKNQGNKQD IQNYRPISIL
PILSKVFERH IFNAVNTYLT ENSLLYRFQS GFRKNHSTDT ALLFLLDQVL LDLDKNNVSG
LVFVDYSKAF DLINHDILLV KLRSYGFPDN VVKLLQSYLL NRKQCVTVNN STSSQLMLTN
GVPQGSILGP LLFLMFVNDL PEAVGSDSIH AYADDTTFKA SANIDNAPLE LERRLQEYMD
KLSKWSSENG MVLNAVKTKA LLITGKRLHS SLVDGNHLSV TLDGAEIEQV TSYKLLGVTL
DQDLTFSDHI SSLKAKLSQR IGLLKKIKRY LPIKERLLYY NALIKPVLMY GSMVWNICDV
KELHCLLRLQ KRAARVILGV DSYSRSVVNF SKLGWLPFFD EIKLNKCTMI FKSLKGDVPI
YIRDLLKTNS SVHNRSTRHG NLNLVCPKYL RNNDGGKAFS VDAVKLWNSL PHDIKNKPKD
KLQSVEREYL KNLQTENQKW SSQTEKRLLG LHKQWEQDKK KLVEEELGYI RATELARVRL
EEKEKYQREV LTIRKQLEEK YAAKAEKLKA DEREKLQSLS TQQQLQEEEA HMQRQKLLED
MLSLKQRETE FDLNQEMKAK TLKLEEERIN VLSQELKIKK SLLEDAEANY NRRLNEEVQR
YKLKCEEEFH DRRQTLELKE KQLQRDLDDF ERKQGVYINA SDELQRTKEK LRELQIQLNN
NKSQLSLALQ KKETMTEKLS EDVEAIKERE DALAKENAML KRNLLRYEEE EKENQRIVSE
LRKKSVESAA DLLHLRDQLS QMEKTTKSKE KSWKDYKTKM ESKLDEECQK RLKYQQLYEE
TTMSQSALNQ EIADLKLTLQ QTQQVLDVEL GRRRANSIPC IESLPSESDS PAGLKTQQEG
DRTPLTDSVM DETSSTVVMI AQSKELFDRL EKEAKELEES YQKFQSRINQ MELDVHPTSR
SPDFHHLTQS LHGNTFG
//
