ID A0A2C6DIF9_9GAMM Unreviewed; 229 AA.
AC A0A2C6DIF9;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=HTH domain {ECO:0000313|EMBL:VFS51113.1};
DE SubName: Full=YafY family transcriptional regulator {ECO:0000313|EMBL:PHI30996.1};
GN ORFNames=CRN84_17490 {ECO:0000313|EMBL:PHI30996.1}, NCTC12282_04852
GN {ECO:0000313|EMBL:VFS51113.1};
OS Budvicia aquatica.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales;
OC Budviciaceae; Budvicia.
OX NCBI_TaxID=82979 {ECO:0000313|EMBL:PHI30996.1, ECO:0000313|Proteomes:UP000224974};
RN [1] {ECO:0000313|Proteomes:UP000224974}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FDAARGOS_387 {ECO:0000313|Proteomes:UP000224974};
RA Minogue T., Wolcott M., Wasieloski L., Aguilar W., Moore D., Tallon L.,
RA Sadzewicz L., Ott S., Zhao X., Nagaraj S., Vavikolanu K., Aluvathingal J.,
RA Nadendla S., Sichtig H.;
RT "FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
RT Supporting development and validation of Infectious Disease Dx tests.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:PHI30996.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=FDAARGOS_387 {ECO:0000313|EMBL:PHI30996.1};
RA Minogue T., Wolcott M., Wasieloski L., Aguilar W., Moore D., Tallon L.J.,
RA Sadzewicz L., Ott S., Zhao X., Nagaraj S., Vavikolanu K., Aluvathingal J.,
RA Nadendla S., Sichtig H.;
RT "FDA dAtabase for Regulatory Grade micrObial Sequences (FDA-ARGOS):
RT Supporting development and validation of Infectious Disease Dx tests.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:VFS51113.1, ECO:0000313|Proteomes:UP000373449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NCTC12282 {ECO:0000313|EMBL:VFS51113.1,
RC ECO:0000313|Proteomes:UP000373449};
RG Pathogen Informatics;
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; PDDX01000001; PHI30996.1; -; Genomic_DNA.
DR EMBL; CAADJA010000002; VFS51113.1; -; Genomic_DNA.
DR RefSeq; WP_029095024.1; NZ_PDDX01000001.1.
DR AlphaFoldDB; A0A2C6DIF9; -.
DR STRING; 1111728.GCA_000427805_02316; -.
DR OrthoDB; 9807255at2; -.
DR Proteomes; UP000224974; Unassembled WGS sequence.
DR Proteomes; UP000373449; Unassembled WGS sequence.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR013196; HTH_11.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR026881; WYL_dom.
DR PANTHER; PTHR34580; -; 1.
DR PANTHER; PTHR34580:SF3; REGULATORY PROTEIN-RELATED; 1.
DR Pfam; PF08279; HTH_11; 1.
DR Pfam; PF13280; WYL; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000224974}.
FT DOMAIN 6..59
FT /note="Helix-turn-helix type 11"
FT /evidence="ECO:0000259|Pfam:PF08279"
FT DOMAIN 139..220
FT /note="WYL"
FT /evidence="ECO:0000259|Pfam:PF13280"
SQ SEQUENCE 229 AA; 26365 MW; 84CE3A14D0BE251D CRC64;
MSRSERLLEL LQLLRGHRYP VSGVDLAAKL GISLRTLYRD IRSLQAQGAP IEGEAGLGYV
LRAGFVLPPL MFTPDEIEAL VLGARWVSER TDAELAEGAR RALSKISAIV TPELRYRLEE
SALLIGPKGE DQLYLSQILK IRKAIESEFK LLISYGDKDR QRTQRVIWPF AIGFFDDVRV
VMAWCELRSD IRHFRIDRIK ELVVTEDVYP QRRQQLLNAW YKLNNISRK
//
