ID A0A2C9U951_MANES Unreviewed; 826 AA.
AC A0A2C9U951;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=LisH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=MANES_16G063800 {ECO:0000313|EMBL:OAY26649.1};
OS Manihot esculenta (Cassava) (Jatropha manihot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae;
OC Manihot.
OX NCBI_TaxID=3983 {ECO:0000313|EMBL:OAY26649.1, ECO:0000313|Proteomes:UP000091857};
RN [1] {ECO:0000313|EMBL:OAY26649.1, ECO:0000313|Proteomes:UP000091857}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AM560-2 {ECO:0000313|Proteomes:UP000091857};
RC TISSUE=Leaf {ECO:0000313|EMBL:OAY26649.1};
RA Bredeson J.V., Prochnik S.E., Lyons J.B., Schmutz J., Grimwood J.,
RA Vrebalov J., Bart R.S., Amuge T., Ferguson M.E., Green R., Putnam N.,
RA Stites J., Rounsley S., Rokhsar D.S.;
RT "WGS assembly of Manihot esculenta.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM004402; OAY26649.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2C9U951; -.
DR STRING; 3983.A0A2C9U951; -.
DR EnsemblPlants; OAY26649; OAY26649; MANES_16G063800.
DR Gramene; OAY26649; OAY26649; MANES_16G063800.
DR OrthoDB; 1410379at2759; -.
DR Proteomes; UP000091857; Chromosome lg16.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR45093:SF5; LISH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR45093; TRANSCRIPTION ACTIVATOR MSS11; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 5.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 5.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000091857};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 542..573
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 584..619
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 627..669
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 709..749
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 794..826
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REGION 87..140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 193..225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 376..467
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 197..225
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 826 AA; 90240 MW; B04EBE52177D20DE CRC64;
MSQNWEADKM LDVYIYDYLM KRKLHNSAKA FQAEGKVSTD PVAIDAPGGF LFEWWSVFWD
IFIARTNEKH SEAAASYIET QIVKARELQQ QQHPKPQQQM QMQQMLLQRH AQQQQQQQQR
DGNPHPSGTA NGLAANDVTR HNPATANALA TKMYEDRLKL PLQRDSLDEA SVKQRLSDLD
PNHASLLKAA ALSGQPPGQT LHGTPGGSGN LQQAQNRNQQ LPVSTQDVKS EINAMINPRT
AGTEGSLIGG QNQGGSNLTL KGWPLTGVDQ LGLLQHQRLM QSPQPLSKFQ LQQQLILQAQ
QNLSSQSVND LERRKLRMLL NNQNLGLGKD GHLSSGDVLG NFGSPMQVNS PTLSRGDTDL
LIKIQQQQYQ HIPLMSQQSQ NSNHSQQQDK VIGSSSVTVD GSMSNTFQGN DQASKGQLGR
KRKQPGSSSG PANSSGTANT TGPMPSSPST PSTHTPGDAI SVPTLPHNSG SSKSLLMFGS
DGLGSLASAS NELADTDRFV DDRTLDDHVE SFFSHDAADL RDRVGQSADI SKGFAFSEIR
TIPASTSKVE CCHFSSDGKL LATGGHDKKA TLWCTESFTA KSTLEEHSQW ITDVRFSPSI
SRLATSSADK TVRVWDADNP GYSLRTFTGH STTVMSVDFH PSKEDLICSC DNNSEIRYWS
IKNGSCVGVF KGGATQTRFQ PHLGRIIAAA AENVVSILDV ETKVCRLKLQ GHKNHIHSVC
WDPSGEYVAS VSDDLVRVWT VGSGSKGEYV HEFNCTGNKF HTCVFHPTYS SLLIIGCYET
LELWNMAENK TMALPAHDKL VSALAVSNVT GLVASASHDK HVKLWK
//
