ID A0A2C9UA92_MANES Unreviewed; 913 AA.
AC A0A2C9UA92;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 21.
DE RecName: Full=RST domain-containing protein {ECO:0000259|PROSITE:PS51879};
GN ORFNames=MANES_16G088600 {ECO:0000313|EMBL:OAY26958.1};
OS Manihot esculenta (Cassava) (Jatropha manihot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae;
OC Manihot.
OX NCBI_TaxID=3983 {ECO:0000313|EMBL:OAY26958.1, ECO:0000313|Proteomes:UP000091857};
RN [1] {ECO:0000313|EMBL:OAY26958.1, ECO:0000313|Proteomes:UP000091857}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AM560-2 {ECO:0000313|Proteomes:UP000091857};
RC TISSUE=Leaf {ECO:0000313|EMBL:OAY26958.1};
RA Bredeson J.V., Prochnik S.E., Lyons J.B., Schmutz J., Grimwood J.,
RA Vrebalov J., Bart R.S., Amuge T., Ferguson M.E., Green R., Putnam N.,
RA Stites J., Rounsley S., Rokhsar D.S.;
RT "WGS assembly of Manihot esculenta.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF4 family.
CC {ECO:0000256|ARBA:ARBA00006178}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM004402; OAY26958.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2C9UA92; -.
DR STRING; 3983.A0A2C9UA92; -.
DR EnsemblPlants; OAY26958; OAY26958; MANES_16G088600.
DR Gramene; OAY26958; OAY26958; MANES_16G088600.
DR OMA; THIIRMS; -.
DR OrthoDB; 1222810at2759; -.
DR Proteomes; UP000091857; Chromosome lg16.
DR GO; GO:0005669; C:transcription factor TFIID complex; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IBA:GO_Central.
DR CDD; cd08045; TAF4; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR022003; RST.
DR InterPro; IPR045144; TAF4.
DR InterPro; IPR007900; TAF4_C.
DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR PANTHER; PTHR15138:SF14; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR Pfam; PF12174; RST; 1.
DR Pfam; PF05236; TAF4; 1.
DR PROSITE; PS51879; RST; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000091857};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 191..262
FT /note="RST"
FT /evidence="ECO:0000259|PROSITE:PS51879"
FT REGION 11..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 118..160
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 261..350
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 426..445
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 480..525
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 561..602
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 741..784
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 808..870
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 37..101
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 261..305
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 317..350
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 429..445
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 480..500
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 584..602
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 817..834
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 835..855
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 913 AA; 100562 MW; 5157950C0184F5A1 CRC64;
MDPSIMKLLE EDEDETMHSG ADVEAFQAAL NRDIGGDAST PQPSDSSVFS HEINQTPNQS
FSNWQTTTQG ENASGASQQQ QEKDQHSSLM GPKHLSSAAE NQQVHNDVMQ ESSQLLLHQK
RPQDDVQKAQ AEQVPLPNPR TPGMQISERN PMPLSERDKI QNPDTESQYL KVNMVNQQNQ
QAMGMEQPGN AKNQGKQIPF VLLLPALKPH LDKDREMQLQ TLFNKLRKNE IAKEQFVRLM
RNIVGDQVLR LAVAKLQSQP GSNQSHLQSQ AFARQHNVRT SVGSTASSAG TVQADPSFLS
AENNNQKSRE VEHQPDSHGI QASQMPSSSA IVNQDRERSS ISVPGHSKQE QHMRFQQTAF
PVYGSNSATY QPYAGTNANT SGSSMKPQPH DLQMRQISHQ SVGATQMGGS TQAINMLSVP
KFERQNPVAD PNRLQSGPIS PYTNKSLLQQ SSVPWKAPMT KGQSSGPSST NYVKQEPFEQ
AIEQQQKSQL SNSQGLPVTP AEQGKSVPGN LKDESLEKQS SKVGCSAPIG MAPSNSVPPS
ISTQLDPNVQ VGSRIPSVAA SAGIPARTPP KKPLIGQKKP LEALGSSSPM SSKKQKVSGA
FSDQSIEQLN DVTAVSGVNL REEEEQLFSG SKEESRVSEA SRRVVQEEEE RLILQKIPLQ
KKLAEIMAKC GLKNINNDVE RCLSLCVEER MCGLISNLIR LSKQRVDAEK PRHWTVITSD
VRQQIMAMNQ KAKEEWEKKQ AEAEKLQKVN EPEGDDGVEG DKEKDEGRMK SMKANKEEDD
KMRTTAANVA ARAAVGGDDM LSKWQLMAEQ ARQKREGGTE ATSGSQLSKD VSRKSTSGRN
MKDNQEPEKR SPASASRAVR KIGRHQASAP QIRVARTITL KDVIAALERE PQMSKSTLIY
RLYERIRSDA STE
//
