ID A0A2C9VZB4_MANES Unreviewed; 304 AA.
AC A0A2C9VZB4;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Sigma 54 modulation/S30EA ribosomal protein C-terminal domain-containing protein {ECO:0000259|Pfam:PF16321};
GN ORFNames=MANES_05G197600 {ECO:0000313|EMBL:OAY51229.1};
OS Manihot esculenta (Cassava) (Jatropha manihot).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae;
OC Manihot.
OX NCBI_TaxID=3983 {ECO:0000313|EMBL:OAY51229.1, ECO:0000313|Proteomes:UP000091857};
RN [1] {ECO:0000313|EMBL:OAY51229.1, ECO:0000313|Proteomes:UP000091857}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. AM560-2 {ECO:0000313|Proteomes:UP000091857};
RC TISSUE=Leaf {ECO:0000313|EMBL:OAY51229.1};
RA Bredeson J.V., Prochnik S.E., Lyons J.B., Schmutz J., Grimwood J.,
RA Vrebalov J., Bart R.S., Amuge T., Ferguson M.E., Green R., Putnam N.,
RA Stites J., Rounsley S., Rokhsar D.S.;
RT "WGS assembly of Manihot esculenta.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM004391; OAY51229.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2C9VZB4; -.
DR STRING; 3983.A0A2C9VZB4; -.
DR EnsemblPlants; OAY51229; OAY51229; MANES_05G197600.
DR Gramene; OAY51229; OAY51229; MANES_05G197600.
DR OMA; TVRMSWD; -.
DR OrthoDB; 1420at2759; -.
DR Proteomes; UP000091857; Chromosome lg5.
DR GO; GO:0022627; C:cytosolic small ribosomal subunit; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0043024; F:ribosomal small subunit binding; IBA:GO_Central.
DR GO; GO:0045900; P:negative regulation of translational elongation; IBA:GO_Central.
DR GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR CDD; cd00552; RaiA; 1.
DR Gene3D; 3.30.160.100; Ribosome hibernation promotion factor-like; 1.
DR Gene3D; 3.30.505.50; Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain; 1.
DR HAMAP; MF_00839; HPF; 1.
DR InterPro; IPR034694; HPF_long/plastid.
DR InterPro; IPR036567; RHF-like.
DR InterPro; IPR003489; RHF/RaiA.
DR InterPro; IPR032528; Ribosom_S30AE_C.
DR InterPro; IPR038416; Ribosom_S30AE_C_sf.
DR NCBIfam; TIGR00741; yfiA; 1.
DR PANTHER; PTHR33231; 30S RIBOSOMAL PROTEIN; 1.
DR PANTHER; PTHR33231:SF1; 30S RIBOSOMAL PROTEIN; 1.
DR Pfam; PF16321; Ribosom_S30AE_C; 1.
DR Pfam; PF02482; Ribosomal_S30AE; 1.
DR SUPFAM; SSF69754; Ribosome binding protein Y (YfiA homologue); 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000091857};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 224..277
FT /note="Sigma 54 modulation/S30EA ribosomal protein C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF16321"
SQ SEQUENCE 304 AA; 34185 MW; D7B74621E3F6B477 CRC64;
MTTLLGSLQI SFNHPRVSLS PKLDTASSSI YALSSKKLRF PSLLSQESSF LNPLALVSNV
KYVKDSRRRG SSVRMSWDGP LSSVKLIIQG KNLELTDTVK NHVEEKVGKA VQKHSHLVRE
VDVRLSVRGG EFGKGPRIRR CEVTLFTKKH GVIRAEEDAE TIYASIDLVS SIIQRKLRKI
KEKVSDHGRH MKGFNRLKVR EPVAEPVKDD VDGVPQDEDE DYIDEIVRTK YFDMPPLTVS
EAIEQLENVD HDFYGFRNEE TGEINIVYKR KAGGYGVIIP KGHGKAEKLE PLVVEPAKEP
SLAE
//
