ID A0A2D0QLQ5_ICTPU Unreviewed; 348 AA.
AC A0A2D0QLQ5;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=DNA-directed RNA polymerases I and III subunit RPAC1 {ECO:0000256|ARBA:ARBA00022083};
GN Name=polr1c {ECO:0000313|RefSeq:XP_017319219.1};
OS Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC Ictaluridae; Ictalurus.
OX NCBI_TaxID=7998 {ECO:0000313|RefSeq:XP_017319219.1};
RN [1] {ECO:0000313|RefSeq:XP_017319219.1}
RP IDENTIFICATION.
RC TISSUE=Blood {ECO:0000313|RefSeq:XP_017319219.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the archaeal Rpo3/eukaryotic RPB3 RNA polymerase
CC subunit family. {ECO:0000256|ARBA:ARBA00025804}.
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DR RefSeq; XP_017319219.1; XM_017463730.3.
DR AlphaFoldDB; A0A2D0QLQ5; -.
DR STRING; 7998.ENSIPUP00000036536; -.
DR Ensembl; ENSIPUT00000037965; ENSIPUP00000036536; ENSIPUG00000024464.
DR GeneID; 108263181; -.
DR KEGG; ipu:108263181; -.
DR CTD; 9533; -.
DR OMA; ECLRHPE; -.
DR OrthoDB; 5472982at2759; -.
DR Proteomes; UP000221080; Chromosome 3.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0001054; F:RNA polymerase I activity; IEA:InterPro.
DR GO; GO:0001056; F:RNA polymerase III activity; IEA:InterPro.
DR CDD; cd07032; RNAP_I_II_AC40; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR HAMAP; MF_00320; RNApol_arch_Rpo3; 1.
DR InterPro; IPR001514; DNA-dir_RNA_pol_30-40kDasu_CS.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR022842; RNAP_Rpo3/Rpb3/RPAC1.
DR InterPro; IPR033901; RNAPI/III_AC40.
DR InterPro; IPR036643; RNApol_insert_sf.
DR PANTHER; PTHR11800; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR11800:SF13; DNA-DIRECTED RNA POLYMERASES I AND III SUBUNIT RPAC1; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
DR PROSITE; PS00446; RNA_POL_D_30KD; 1.
PE 3: Inferred from homology;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|RefSeq:XP_017319219.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 61..340
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
SQ SEQUENCE 348 AA; 39186 MW; 6E84AB4A904FAB45 CRC64;
MAVPMSNVDE IRDRVILGEF GVKNVHSTNF PGNYPGYDDT WDLGKFKKNF RLDVVHMDEN
TLEFDMVGID AAIANAFRRI LLAEVPTMAV EKVFIYNNTS IIQDEILAHR LGLVPIKADP
RLFEYRNTGD EEGTEIDTIH LQLKIKCTRN PRASKDASDP KELYLNHMVY SRDMKWVPIG
NQADVFADAN IGPVHGDILL AQLRPGQELD IVMHCVKGIG KDHAKFSPVA TASYRLLPEI
TLLKTIEGEK AERLKRCFSP GVIELEDVDG KQVAKVVNSR LDTCSREVLR HDDLKSLVKL
GRVRDHFLFS VESTGILPPD VLFSEAVNVL IAKCQKFLTE LDSVNEME
//
