ID A0A2D0SGH1_ICTPU Unreviewed; 608 AA.
AC A0A2D0SGH1;
DT 20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT 20-DEC-2017, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=AT-rich interactive domain-containing protein 3 {ECO:0000256|RuleBase:RU369100};
DE Short=ARID domain-containing protein {ECO:0000256|RuleBase:RU369100};
GN Name=arid3b {ECO:0000313|RefSeq:XP_017341576.1};
OS Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC Ictaluridae; Ictalurus.
OX NCBI_TaxID=7998 {ECO:0000313|RefSeq:XP_017341576.1};
RN [1] {ECO:0000313|RefSeq:XP_017341576.1}
RP IDENTIFICATION.
RC TISSUE=Blood {ECO:0000313|RefSeq:XP_017341576.1};
RG RefSeq;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- FUNCTION: Transcription factor. {ECO:0000256|RuleBase:RU369100}.
CC -!- SUBUNIT: Homodimer. {ECO:0000256|RuleBase:RU369100}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU369100}.
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DR RefSeq; XP_017341576.1; XM_017486087.3.
DR AlphaFoldDB; A0A2D0SGH1; -.
DR STRING; 7998.ENSIPUP00000026222; -.
DR Ensembl; ENSIPUT00000027323; ENSIPUP00000026243; ENSIPUG00000017749.
DR GeneID; 108275332; -.
DR KEGG; ipu:108275332; -.
DR CTD; 10620; -.
DR OrthoDB; 445024at2759; -.
DR Proteomes; UP000221080; Chromosome 14.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd16867; ARID_ARID3; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR InterPro; IPR045147; ARI3A/B/C.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR023334; REKLES_domain.
DR PANTHER; PTHR15348:SF30; AT-RICH INTERACTIVE DOMAIN 3B (BRIGHT-LIKE); 1.
DR PANTHER; PTHR15348; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT; 1.
DR Pfam; PF01388; ARID; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SUPFAM; SSF46774; ARID-like; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS51486; REKLES; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU369100};
KW Nucleus {ECO:0000256|RuleBase:RU369100};
KW Transcription {ECO:0000256|RuleBase:RU369100};
KW Transcription regulation {ECO:0000256|RuleBase:RU369100}.
FT DOMAIN 270..362
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 475..574
FT /note="REKLES"
FT /evidence="ECO:0000259|PROSITE:PS51486"
FT REGION 99..164
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 191..256
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 375..442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 524..545
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 571..608
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 480..507
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 99..122
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 139..158
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 200..214
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 215..246
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..429
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 608 AA; 65555 MW; 829FC5DA5BA8C5F5 CRC64;
MVDNSSSSKA QTPILSQDSG LAGAFSQTAL GAVAGVKLEA VMEQLQRQQQ AKLDMERKER
HISEAHILYA QQLAAQHAIM ASARAQGIPV NPEYFSNSSR EQVLKNSQGP PARVSTQSSV
ESAQDGEEED MSRGPASAGE EDEDEEMMDG EDGSEDDESQ GLEFLRKQSL ALQQQGVGIA
QYPFPVYAAS PSAVKKRARS PPPKVKDEPE DSPSPTEQHS FNTPNGLADW SFDDSIKQNG
NASWNDESDG GRGRGEASRD FAKLYELDSD PNRKEFLDDL FTFMQKRGTP VNRIPIMAKQ
VLDLYKLYKL VTEKGGLVEV INKKIWREIT KGLNLPTSIT SAAFTLRTQY MKYLYPYECE
KKGLSSPGEL QAAIDSNRRE GRRPGYSNSL YRFSPSPSGG APHLLSPPKM HLPNSGHNGL
QSTPSPALKN GTVPEDGPAS MLPGRLPLAL ALGHQQQLAR AATLEQLRER LETGMGAPAL
ATGTSAIEGA ERKMARLAEE QQRLLQQAFQ QNLLAMASQV NPANLRLNTP NTPREEKQDL
SLSISSNGSA SITVSVEVNG IIYSGSLYAQ KPSGTPATPI GQSSAMNPSI PSSSKGSGST
EPAASGSS
//