GenomeNet

Database: UniProt
Entry: A0A2D0SGH1_ICTPU
LinkDB: A0A2D0SGH1_ICTPU
Original site: A0A2D0SGH1_ICTPU 
ID   A0A2D0SGH1_ICTPU        Unreviewed;       608 AA.
AC   A0A2D0SGH1;
DT   20-DEC-2017, integrated into UniProtKB/TrEMBL.
DT   20-DEC-2017, sequence version 1.
DT   24-JAN-2024, entry version 24.
DE   RecName: Full=AT-rich interactive domain-containing protein 3 {ECO:0000256|RuleBase:RU369100};
DE            Short=ARID domain-containing protein {ECO:0000256|RuleBase:RU369100};
GN   Name=arid3b {ECO:0000313|RefSeq:XP_017341576.1};
OS   Ictalurus punctatus (Channel catfish) (Silurus punctatus).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes;
OC   Ictaluridae; Ictalurus.
OX   NCBI_TaxID=7998 {ECO:0000313|RefSeq:XP_017341576.1};
RN   [1] {ECO:0000313|RefSeq:XP_017341576.1}
RP   IDENTIFICATION.
RC   TISSUE=Blood {ECO:0000313|RefSeq:XP_017341576.1};
RG   RefSeq;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- FUNCTION: Transcription factor. {ECO:0000256|RuleBase:RU369100}.
CC   -!- SUBUNIT: Homodimer. {ECO:0000256|RuleBase:RU369100}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU369100}.
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DR   RefSeq; XP_017341576.1; XM_017486087.3.
DR   AlphaFoldDB; A0A2D0SGH1; -.
DR   STRING; 7998.ENSIPUP00000026222; -.
DR   Ensembl; ENSIPUT00000027323; ENSIPUP00000026243; ENSIPUG00000017749.
DR   GeneID; 108275332; -.
DR   KEGG; ipu:108275332; -.
DR   CTD; 10620; -.
DR   OrthoDB; 445024at2759; -.
DR   Proteomes; UP000221080; Chromosome 14.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   CDD; cd16867; ARID_ARID3; 1.
DR   Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR   InterPro; IPR045147; ARI3A/B/C.
DR   InterPro; IPR001606; ARID_dom.
DR   InterPro; IPR036431; ARID_dom_sf.
DR   InterPro; IPR023334; REKLES_domain.
DR   PANTHER; PTHR15348:SF30; AT-RICH INTERACTIVE DOMAIN 3B (BRIGHT-LIKE); 1.
DR   PANTHER; PTHR15348; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT; 1.
DR   Pfam; PF01388; ARID; 1.
DR   SMART; SM01014; ARID; 1.
DR   SMART; SM00501; BRIGHT; 1.
DR   SUPFAM; SSF46774; ARID-like; 1.
DR   PROSITE; PS51011; ARID; 1.
DR   PROSITE; PS51486; REKLES; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU369100};
KW   Nucleus {ECO:0000256|RuleBase:RU369100};
KW   Transcription {ECO:0000256|RuleBase:RU369100};
KW   Transcription regulation {ECO:0000256|RuleBase:RU369100}.
FT   DOMAIN          270..362
FT                   /note="ARID"
FT                   /evidence="ECO:0000259|PROSITE:PS51011"
FT   DOMAIN          475..574
FT                   /note="REKLES"
FT                   /evidence="ECO:0000259|PROSITE:PS51486"
FT   REGION          99..164
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          191..256
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          375..442
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          524..545
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          571..608
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          480..507
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        99..122
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        139..158
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        200..214
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        215..246
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        415..429
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   608 AA;  65555 MW;  829FC5DA5BA8C5F5 CRC64;
     MVDNSSSSKA QTPILSQDSG LAGAFSQTAL GAVAGVKLEA VMEQLQRQQQ AKLDMERKER
     HISEAHILYA QQLAAQHAIM ASARAQGIPV NPEYFSNSSR EQVLKNSQGP PARVSTQSSV
     ESAQDGEEED MSRGPASAGE EDEDEEMMDG EDGSEDDESQ GLEFLRKQSL ALQQQGVGIA
     QYPFPVYAAS PSAVKKRARS PPPKVKDEPE DSPSPTEQHS FNTPNGLADW SFDDSIKQNG
     NASWNDESDG GRGRGEASRD FAKLYELDSD PNRKEFLDDL FTFMQKRGTP VNRIPIMAKQ
     VLDLYKLYKL VTEKGGLVEV INKKIWREIT KGLNLPTSIT SAAFTLRTQY MKYLYPYECE
     KKGLSSPGEL QAAIDSNRRE GRRPGYSNSL YRFSPSPSGG APHLLSPPKM HLPNSGHNGL
     QSTPSPALKN GTVPEDGPAS MLPGRLPLAL ALGHQQQLAR AATLEQLRER LETGMGAPAL
     ATGTSAIEGA ERKMARLAEE QQRLLQQAFQ QNLLAMASQV NPANLRLNTP NTPREEKQDL
     SLSISSNGSA SITVSVEVNG IIYSGSLYAQ KPSGTPATPI GQSSAMNPSI PSSSKGSGST
     EPAASGSS
//
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