ID A0A2D1U0M9_9SPHI Unreviewed; 1096 AA.
AC A0A2D1U0M9;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:ATP55156.1};
GN ORFNames=CPT03_01075 {ECO:0000313|EMBL:ATP55156.1};
OS Pedobacter ginsengisoli.
OC Bacteria; Bacteroidota; Sphingobacteriia; Sphingobacteriales;
OC Sphingobacteriaceae; Pedobacter.
OX NCBI_TaxID=363852 {ECO:0000313|EMBL:ATP55156.1, ECO:0000313|Proteomes:UP000223749};
RN [1] {ECO:0000313|EMBL:ATP55156.1, ECO:0000313|Proteomes:UP000223749}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=T01R-27 {ECO:0000313|EMBL:ATP55156.1,
RC ECO:0000313|Proteomes:UP000223749};
RA Weon H.-Y., Lee S.A., Sang M.K., Song J.;
RT "Whole genome of Pedobacter ginsengisoli T01R-27 isolated from tomato
RT rhizosphere.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cell outer membrane
CC {ECO:0000256|ARBA:ARBA00004571}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004571}. Membrane
CC {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the TonB-dependent receptor family.
CC {ECO:0000256|RuleBase:RU003357}.
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DR EMBL; CP024091; ATP55156.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2D1U0M9; -.
DR KEGG; pgs:CPT03_01075; -.
DR OrthoDB; 604358at2; -.
DR Proteomes; UP000223749; Chromosome.
DR GO; GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.40.170.20; TonB-dependent receptor, beta-barrel domain; 1.
DR Gene3D; 2.170.130.10; TonB-dependent receptor, plug domain; 1.
DR InterPro; IPR008969; CarboxyPept-like_regulatory.
DR InterPro; IPR012910; Plug_dom.
DR InterPro; IPR037066; Plug_dom_sf.
DR InterPro; IPR023996; TonB-dep_OMP_SusC/RagA.
DR InterPro; IPR023997; TonB-dep_OMP_SusC/RagA_CS.
DR InterPro; IPR000531; TonB-dep_rcpt_b-brl.
DR InterPro; IPR036942; TonB_rcpt_b-brl_sf.
DR NCBIfam; TIGR04056; OMP_RagA_SusC; 1.
DR NCBIfam; TIGR04057; SusC_RagA_signa; 1.
DR PANTHER; PTHR47322; SUSC HOMOLOG-RELATED; 1.
DR PANTHER; PTHR47322:SF22; TONB-DEPENDENT RECEPTOR SUSC; 1.
DR Pfam; PF13620; CarboxypepD_reg; 1.
DR Pfam; PF07715; Plug; 1.
DR Pfam; PF00593; TonB_dep_Rec; 1.
DR SUPFAM; SSF49464; Carboxypeptidase regulatory domain-like; 1.
DR SUPFAM; SSF56935; Porins; 1.
PE 3: Inferred from homology;
KW Cell outer membrane {ECO:0000256|ARBA:ARBA00023237};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|RuleBase:RU003357};
KW Reference proteome {ECO:0000313|Proteomes:UP000223749};
KW Signal {ECO:0000256|SAM:SignalP};
KW TonB box {ECO:0000256|ARBA:ARBA00023077, ECO:0000256|RuleBase:RU003357};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane beta strand {ECO:0000256|ARBA:ARBA00022452};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..31
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 32..1096
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5013608458"
FT DOMAIN 139..247
FT /note="TonB-dependent receptor plug"
FT /evidence="ECO:0000259|Pfam:PF07715"
FT DOMAIN 488..953
FT /note="TonB-dependent receptor-like beta-barrel"
FT /evidence="ECO:0000259|Pfam:PF00593"
SQ SEQUENCE 1096 AA; 122027 MW; C952205006BBC03F CRC64;
MQLKITLLFK RFSRRLLLLL LAFSITSLGF AQVSPGGKVT GSINDEKGLP LVGVSVMAVN
ESTQLKKTTS SDNKGLFTFT DLPAGKGYSF VISYVGFRTQ NLKNYEVKTG EQISLIVKML
EDQSDLNEVV VVGYGTQKKV NLTGAVATVN AKTLEDRPIA NITQGLQGAV PNLNISFGDG
RPGSEGKINV RGYTSINSGG SGGGPLVLVD GVPGAINNLN PKDIASISVL KDASSAAIYG
ARAAFGVVLV TTKNGKKGRT TITYSNNFGF TDPTTSTDFM TDAYDAAKMN DEAFIRAVGN
SYTGYTDEDY AYLLKRRTDK SLPDYIIDNR KGKDQYVYYG DTDWWHTIFR DRQTSMDHSL
SVSGGSENTD FLFSGRMYQK NGMMQINQDK YKSYNLRAKI NTKVNKWLTI GNNLQFNTSN
YDYPGWGVNA NFVSVSVHAL PSYLPKNPDG TATYRTELNN YTIGDGLFAD LLHGKSKGNE
KEYEFINLFN VTAHLAEGLE LKGNYTYNFK PSGVWARRAQ APWSIYPGVI SQFGFDQFSE
TNYTRQSHVV NIFGDYTKTL GKHTFKALLG YNQELNTYKR VFAQRNDLIS QDLNDLDLGS
GDVFATGNAN EYALLGGFFR LNYDYEGKYL LEVNGRYDGT SKFPPGKRFG FFPSVSAGWR
ISQEKFFPLK GIVDELKFRG SYGSLGNQQE AAEYGYIPLL SRGTTDYITD GKKTEYLSSP
TPISPNLTWE RATSVNFGVD AGFLDNRLTA TFDYYVRNTF DMLTAGKTVS AVFGAGSPKQ
NAADLRSKGW ELALNWTQNG TLAGKPLNWN IGVGLSDYTA EITRFDNPNN LLNNYYVGQQ
IGEIWGYRVD GFFKTDEEAQ AYKINQNYVN QQRLKAPGNW AKLSAGDLKF LDINGDGIVN
NGKNTLADHG DLEVIGNSLP RYSYGINAGI NWGNFDISAM FQGIGKQQWY PGNNADKFWG
PFSRPYYSFV DKDFLKDVWT PENPNAYFPK LRGYEALNDR GELNVKNDRY LQDLAYIRLK
NLTVGFSLPE TVLKKIKLSK VRVYLSGENL FTFTKLRSNY IDPEQAAGDY NNSTVDANAR
VYPFSKVYSF GLDVSF
//
