ID A0A2G2V916_CAPBA Unreviewed; 862 AA.
AC A0A2G2V916;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=Nuclear pore complex protein {ECO:0000256|RuleBase:RU365072};
DE Flags: Fragment;
GN ORFNames=CQW23_30938 {ECO:0000313|EMBL:PHT29463.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT29463.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT29463.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT29463.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- FUNCTION: Functions as a component of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBUNIT: Part of the nuclear pore complex (NPC).
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nuclear pore complex
CC {ECO:0000256|RuleBase:RU365072}. Nucleus membrane
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- SIMILARITY: Belongs to the nucleoporin Nup84/Nup107 family.
CC {ECO:0000256|RuleBase:RU365072}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT29463.1}.
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DR EMBL; MLFT02000109; PHT29463.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2V916; -.
DR STRING; 33114.A0A2G2V916; -.
DR Proteomes; UP000224567; Unassembled WGS sequence.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IEA:UniProtKB-UniRule.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 1.10.3450.20; -; 1.
DR Gene3D; 1.20.190.50; -; 2.
DR InterPro; IPR007252; Nup84/Nup107.
DR PANTHER; PTHR13003:SF2; NUCLEAR PORE COMPLEX PROTEIN NUP107; 1.
DR PANTHER; PTHR13003; NUP107-RELATED; 1.
DR Pfam; PF04121; Nup84_Nup100; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|RuleBase:RU365072};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nuclear pore complex {ECO:0000256|RuleBase:RU365072};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU365072};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000224567};
KW Translocation {ECO:0000256|ARBA:ARBA00023010,
KW ECO:0000256|RuleBase:RU365072};
KW Transport {ECO:0000256|ARBA:ARBA00022448, ECO:0000256|RuleBase:RU365072}.
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:PHT29463.1"
SQ SEQUENCE 862 AA; 97810 MW; 9497BB4843194FD8 CRC64;
QLPTTSHLEA CQFVVKNHTA QLCLRIVQWL EGLASKALDL DRKVRGSHVG TYLPSSGIWH
HTQRFLKKGV SNPKTINHLD FDAPTREQAQ QLPDDKKQDE SLLEDVWTLL RAGRLEEACN
LCRSAGQSWR AATLSPFGGF DLFPSMEALV RNGKNRTLQA IELESGIGHQ WRLWKWACFC
ASENIADQDG GKYEAAVYAA QCSNLKRILP TCMDWESACW AMSKSWLDFQ VDVELARLQP
GGYSKNFEEA INKSPDFTDG ASQPTGGPDS WPLQVVNQQP RHLSALLQKL HSSDTVHEIV
ARSCKEQQRQ IEMNLMLGDI PSLLDIIWSW ISPSEDDETF FRPHGDPQMM RLGAHLVLVL
RYLLEDQMKD DFREKLLTVG DLILHMYTMF LFTKQHEELV GIYASQLARH RCIDLFVHMM
DLRLNSSFHV RYKIFLSAIE YLPFAPEDDS KGSFEEIIER VLSRSREIKV GKYDSDTDVA
EQHRLQSLQK AMVIQWLCFT PPSTINNSRS VSMKLLFRAL MHSNVLFREF ALISMWRVPA
MPIGAHTLLS SLAEPLKQLS DDLVSDKSHE FSKNLKEFQD WSEFYSCDAT YRKWLKVELE
NAEISPIELS DEENQKEVIA ARETLDASLS LLQRQENPWL VPTEDRVLDT DEPVFLELHA
TAMLCSSSGD CMAPDATVCT ALMSALYSSV SEEEVLNRQI MVNVSISSRD NYCVEVVLRC
LATESDGLGP HKFHDGGILA AMFAAGFKGE LVRFQAGVTM EISRLDAWYS GSDGSIDGPA
TYIVHGLCRR CCIPEVALRC MQVSVSLLES GNPPNNHDEL INLVTNPETG FLRLFSQHQL
QEFLLFEREY TIHKMELEES TV
//
