ID A0A2G2VCE1_CAPBA Unreviewed; 697 AA.
AC A0A2G2VCE1;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=Tubby-like F-box protein {ECO:0000256|RuleBase:RU361125};
GN ORFNames=CQW23_29755 {ECO:0000313|EMBL:PHT30660.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT30660.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT30660.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT30660.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- SIMILARITY: Belongs to the TUB family. {ECO:0000256|ARBA:ARBA00007129,
CC ECO:0000256|RuleBase:RU361125}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT30660.1}.
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DR EMBL; MLFT02000026; PHT30660.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2VCE1; -.
DR STRING; 33114.A0A2G2VCE1; -.
DR Proteomes; UP000224567; Unassembled WGS sequence.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProt.
DR CDD; cd22153; F-box_AtTLP-like; 1.
DR Gene3D; 1.20.1280.50; -; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR025659; Tubby-like_C.
DR InterPro; IPR000007; Tubby_C.
DR InterPro; IPR018066; Tubby_C_CS.
DR PANTHER; PTHR16517:SF97; TUBBY-LIKE F-BOX PROTEIN; 1.
DR PANTHER; PTHR16517; TUBBY-RELATED; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF01167; Tub; 1.
DR PRINTS; PR01573; SUPERTUBBY.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF54518; Tubby C-terminal domain-like; 1.
DR PROSITE; PS01200; TUB_1; 1.
DR PROSITE; PS01201; TUB_2; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000224567}.
FT DOMAIN 324..367
FT /note="F-box"
FT /evidence="ECO:0000259|Pfam:PF12937"
FT DOMAIN 385..692
FT /note="Tubby C-terminal"
FT /evidence="ECO:0000259|Pfam:PF01167"
SQ SEQUENCE 697 AA; 79423 MW; 6D51A8F670E0D982 CRC64;
MVINKGNKKR NAEAWPKIKW DSLTLASALE MEEKLKSEGI GGVEGVRRKV VSKKVAHAKL
VEYKDDQERQ TNKEEYKVAK REAKLAVMTA KIAAFDSLYV ALEEKDEDKK LYRLAKAREW
RDRDLDQVKH IKVEEVKEII RRMRWGRATG PYEIPVNFWK STSGAGEEKD LHMVFIDLEK
TYERVPREIL WRCLEARRAL VAYARSIQDM YNGPKTRVRT LDSQSIQKRE RFKHLGSIIQ
VNSDIDEDIT YHIGAGWLKW RLTSGVLCDK KVPSKLKVRD VRDSFGSLSR RSFDVRLSGH
QSGKSHGSFH DLSDQLPVIQ NSCWASLPPE LLFDVIRRLE ESENSWPARK HVVACASVCR
SWRIMCQEIV KSPEVCGKLT FPVSLKQPGP RDGMIQCFIK RDKSNLTYHL FLCLSPALLV
ENGKFLLSAK RTRRTTCTEY VISMDAENIS RSSNTYLGKL RSNFLGTNFV IYDTQPPYTF
ANILPPGRTS RRFYSKKVSP KVPTESYSIA QIKYELNVLG TRGPRKMHCV MHSIPASALD
VGGSVPGQPE LLPRSLEDSF RSISFSKSLD HSTDFSSSRF SDIVRASSNA EDDSKVKPLV
LKNKSPRWHE QLQCWCLNFR GRVTVASVKN FQLIAFNQPA AGGLTTSRSS QLDHDKVILQ
FGKIGKDVFT MDYRYPLSAV QAFAICLSSF DTKLACE
//
