ID A0A2G2VIJ9_CAPBA Unreviewed; 1137 AA.
AC A0A2G2VIJ9;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=DIRP domain-containing protein {ECO:0000259|SMART:SM01135};
GN ORFNames=CQW23_29124 {ECO:0000313|EMBL:PHT32787.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT32787.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT32787.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT32787.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT32787.1}.
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DR EMBL; MLFT02000012; PHT32787.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2VIJ9; -.
DR STRING; 33114.A0A2G2VIJ9; -.
DR Proteomes; UP000224567; Chromosome 12.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0017053; C:transcription repressor complex; IEA:InterPro.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IEA:UniProt.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0010597; P:green leaf volatile biosynthetic process; IEA:UniProt.
DR CDD; cd00167; SANT; 1.
DR Gene3D; 1.20.58.1880; -; 1.
DR InterPro; IPR033471; DIRP.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR010561; LIN-9/ALY1.
DR InterPro; IPR001005; SANT/Myb.
DR PANTHER; PTHR21689:SF7; DIRP DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR21689; LIN-9; 1.
DR Pfam; PF06584; DIRP; 1.
DR Pfam; PF00249; Myb_DNA-binding; 1.
DR SMART; SM01135; DIRP; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000224567}.
FT DOMAIN 633..734
FT /note="DIRP"
FT /evidence="ECO:0000259|SMART:SM01135"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 120..153
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 172..194
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 354..373
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 430..594
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1045..1064
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..29
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 30..48
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 488..519
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 546..562
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1137 AA; 127391 MW; C7458725124C6903 CRC64;
MAPTKKSRSV NKRFSPTTEI SPSKDGISDN LKKSSQRKRK LSDMLGPKWS DEDLTHFYQA
YRKYGKDWKK VAGAVKPRTA EMVEALYTMN RAYLSLPEGT ASVVGLIAMM TDHYCNLAAS
DSDQESNEDA GTSRKPQKRA RVKVQPNVSK TSEVASPTLA ATHGCLTLLK KKRSGGSRPR
AVGKRTPRFP VSFSNENPMG EEYFSPSRRS LKLQADDTDD DVKIALVLTE ASQRGGSPQV
SQTLNRWTDS AMSSPLETAE RKRVKMSMGD RRLLSNEVDE EEGSMEADTG ELLRYKDDLA
DTGTISRAAQ KGRRPYREKL EVDSGDNHFD DIKEACSGTE EGQRLGVVRG KLEMEASDEK
NSRTSLQGPR KRSKKMFFRR DEDSPFDALQ TLADLSLMMP TENEDESMVP ATDEIDDHVD
ESGSLEAVPA NKHRDKRGSE GVISRWSQPV SKFGVAPSKT SKHGKVRPTD VSAVPETKQV
RKAQKTTSSK ARKTEVHNNN EVTDSQEAEA KELSKKATSK VKRSNQVVLP KLIKDQEHES
CADPRTEQSD SAQSTAQIPV ESQVNIPAKV RSRRKMDLKK PQRQKKMKIP DKSLDDTSAS
VTAFHDRAFS LKENISNLLS KHQVRSWSIY EWFYSAIDYP WFAQKEFVEY LDHVGLGHVP
RLTRVEWSVI RSSLGRPRRF SVQFLNEERD KLNQYRESVR THYTELREGT REGLPADLAR
PLSVGQRVIA IHPKTREIHD GSVLTVDRSR CRVQFDRPEL GVEFVMDFEC MPLNPFENMP
TSFKRHAHGV DKFLGSFNEL KVNVRENEFM KFPAGGNMEN GEVFSHFSPP SRPISNLLMQ
TKVASAEADM QCKSGVMKPA AHQQTTPKIF LAAQLQAKEA DVQALAEFNR ALDKKEAVVS
ELRRMNDDVL EHEKNNDYSL KDSEPFKKQY AAVLMQLNEV NDQVAAALIR LRQRNNHPGS
LPFEWPGPVT NFVDPSVLGT FDHCTSQSQE SEFFVNEIIE SSKTKARTMV DAAVQAMSSF
NGGENTTDKI EAAIDYVNDR IPLDDSCMTS PPDPKSKNAS DKNEAEIPSE LITNCISTLL
MIQKCSEGQF PPSDVAKVLD SAVASLQPCC SQNSGIYGEI QKCMGIIRNQ ILAKIPT
//
