ID A0A2G2VNI9_CAPBA Unreviewed; 1014 AA.
AC A0A2G2VNI9;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=Pentatricopeptide repeat-containing protein, mitochondrial {ECO:0008006|Google:ProtNLM};
GN ORFNames=CQW23_26332 {ECO:0000313|EMBL:PHT34532.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT34532.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT34532.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT34532.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT34532.1}.
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DR EMBL; MLFT02000011; PHT34532.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2VNI9; -.
DR STRING; 33114.A0A2G2VNI9; -.
DR Proteomes; UP000224567; Chromosome 11.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 7.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 13.
DR PANTHER; PTHR47932; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47932:SF48; PPR_LONG DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 3.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 13.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000224567};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 93..123
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 166..200
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 236..270
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 271..305
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 306..340
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 341..371
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 406..440
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 441..475
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 682..716
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 717..751
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 752..786
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 787..821
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 822..856
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 1014 AA; 113667 MW; 448E927EFEEEE850 CRC64;
MILVSLLKSG ITPTTTHFNQ FLLFLSQSKK FKLIIHLFKS NQFKPNSNSH RIFIQAKKRL
VNSSIQQLCE TRNPGKALST LQDCLVSDGF LLSSYTFSSL IYSLCSKGRM DEAIEVLQSM
NSEKNRYPFD NFVCSCVISG FLSVGNADIA VKFFENAVSL GCLKPNIVTY TGLVSAYCRL
GRINEISDLV AKMGMDGLEL DGVFYCNWIY GYFREGGIEE ALCRYTEMVC RRIELDVIGY
TILIDGFSKE GHVEKAVGFL YRMRKHSLQP NLVTLTAVIL GFCKKGKMCE AFAVFKLVED
LQIEADEFVY AVLIDGVCRK GDIERAFELL GEMEKKGIKP SVVTYNTIIN GLCKAGRMIE
ADDVSKGIPG DIITYSTLLH GYIEEENVTG MLETKNRVEA AAVSLDVTMC NLLIKGLFMV
GLFEDALAIY KKISEMGLTS NSVTYCTMIE GYSKVGMIDE ALEMFDEFRK TSTTSAACYN
CTIQGLCKND MPDMAAEVFI ELIDRGLPLS TRIYMMLVKK LFGVKGAHGV LDLFQRLGRA
VHEKFCSMCT DAVSFLCNKG LSEAAFDLLM VIQRNGFVLS KKSYYLIMRS LLCGGKTFLT
GLLLTTFIKN YGMFELRTKE ILVYFLCIKN VETALQFLAT MKGDISEVTF PAEVLRILTK
GGRYLDAFNL VVGAGDKLPL LDVVDYSIVI DGLCKGGHID KALYLCNFAK NNGVSFNIVT
YNSVINGLCR QGCMFEAFRL FDSLEKDDIV PSEITYGILI DTLSKEGLLE DARRLFQEMS
LKNLRPSTHI YNSLIDGCSK FGLVEETLKL LLDLQAKDLI PDEFTVSAVL NSYCQKGDME
GALGFFSEFK TRGTLPDFLG FMYLVRGLCD KGRMEESRCI LREMFQSKSV IDLLGRVESE
IGTESIGSFL SLLCEQGSIQ EAVNILNEVV SMFFPVREKR VDYKDLFCKY KTDIDSRSCE
SRRLVKASNS RHNQDTQVTQ LFDFNSYYCR IAFLCSKGKY DNANEVAKIV TGFT
//
