ID A0A2G2VYL6_CAPBA Unreviewed; 869 AA.
AC A0A2G2VYL6;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE SubName: Full=Protein DEFECTIVE IN EXINE FORMATION 1 {ECO:0000313|EMBL:PHT38033.1};
GN ORFNames=CQW23_21606 {ECO:0000313|EMBL:PHT38033.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT38033.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT38033.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT38033.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT38033.1}.
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DR EMBL; MLFT02000009; PHT38033.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2VYL6; -.
DR STRING; 33114.A0A2G2VYL6; -.
DR Proteomes; UP000224567; Chromosome 9.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR045232; FAM234.
DR InterPro; IPR013517; FG-GAP.
DR InterPro; IPR028994; Integrin_alpha_N.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR PANTHER; PTHR21419; -; 1.
DR PANTHER; PTHR21419:SF23; PROTEIN DEFECTIVE IN EXINE FORMATION 1; 1.
DR Pfam; PF13517; FG-GAP_3; 1.
DR SUPFAM; SSF69318; Integrin alpha N-terminal domain; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000224567};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..869
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5013558757"
FT TRANSMEM 833..852
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REGION 237..283
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 238..261
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 262..279
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 869 AA; 97538 MW; 2600DC8E669CA664 CRC64;
MKLRVVLLCF LILSSNFCHL QSEEERKSNK FREREATDDS AAYPNLDEDE LLNTQCPQHL
ELRWQTEVSS SVYASPLIAD INSDGKLEVV VPSFVHYLEV LEGSDGDKLP GWPAFHQSTV
HSSPLLYDID KDGVREIGLA TYNGEVLFFR VSGYLMSDKL EIPRLKVKKK WFEGLNSVPV
DRSHPDVHDD QLIQEHLMEF VARHNASSHG GNHSDSTASA VHNETLSVLE EVHPDASNAS
ISLPSEVSYD NSSNLEDQKL KNNSLGDAET MRKGKNNSLD DAETNMANLN NSILSSENEK
IRNLENGTNT RRRLLQDDVS KRSEEDVHAA TVENEEGLEA DADSSFDLFR DSDELADEYN
YDYDDYVDEH QWEDEEFREP EHEKAEDYVD IDAHVLCTPV IADIDSDGVS EMIVAVSYFF
DHEYYQNSEH LKELGDIDIE KYISGGIVVF NLDTKQVKWT QQLDLSTDSG NFRPYIHSSP
TVVDLDGDGN LDILVGTSYG LFYVLDHKGK VRDKFPLEMA EIQGAVIAAD INDDGKIELV
TTDSHGNVAA WTAQGKEIWE KHLKSLVPQG PAVGDVDGDG HTDIVVPTLS GNIYVLSGKD
GSIVRPYPYR THGRVMNQVL LVDLTKRGQK KKGLTIVTTS FDGYLYLIDG PTSCADVVDI
GETSYSMVLA DNVDGGDDLD LIVTTMNGNV YCFSTPSPHH PLKSWRSPNQ GRNNAAYRLD
REGVYATPSS RVFRDEEGKS FWVEIEIFDK YRYPSGSQAP YNVTVSLLVP GNYQGDRTIK
QNKIFNQPGK HRLMLPVVGV RTAGTVLVEM VDKNGLYFSD DFSLTFHFHY YKLLKWLLVL
PMLGMFGVLV ILRPQEAMPL PSFSRNTNL
//
