ID A0A2G2VYP7_CAPBA Unreviewed; 284 AA.
AC A0A2G2VYP7;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=RIN4 pathogenic type III effector avirulence factor Avr cleavage site domain-containing protein {ECO:0000259|Pfam:PF05627};
GN ORFNames=CQW23_21690 {ECO:0000313|EMBL:PHT38117.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT38117.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT38117.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT38117.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT38117.1}.
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DR EMBL; MLFT02000009; PHT38117.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2VYP7; -.
DR STRING; 33114.A0A2G2VYP7; -.
DR Proteomes; UP000224567; Chromosome 9.
DR InterPro; IPR040387; RIN4/NOI4.
DR InterPro; IPR008700; TypeIII_avirulence_cleave.
DR PANTHER; PTHR33159; RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN; 1.
DR PANTHER; PTHR33159:SF111; RPM1-INTERACTING PROTEIN 4-LIKE ISOFORM X1; 1.
DR Pfam; PF05627; AvrRpt-cleavage; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000224567}.
FT DOMAIN 221..256
FT /note="RIN4 pathogenic type III effector avirulence factor
FT Avr cleavage site"
FT /evidence="ECO:0000259|Pfam:PF05627"
FT REGION 50..279
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 103..118
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 139..153
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 187..202
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 254..268
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 284 AA; 31872 MW; 7D585CF715554BDC CRC64;
MEKESLYSAV SAWGNIYQEE DYRPNVPKFG NWENEDNTPY TVYFEKARQT RGTGKIINPN
DPEENPDMFP NLAPPRAAAP QISKPKTLTE EPPIGHGGAA RQTWDRRLSK EDGEFRHYAN
SPARNQNMGR RGSIEPHHQH WCGSSSGRTG RPSAGSEHSF DKSPLHPHYH AKVNNAGRGA
ASPAWEEKNN SYDSSHGTPG RSFESSHAAP GRSKVKQESS DRGAAVPRFG EWDENDPQSA
DNYTHIFNKM REEKQGNPTG TPTRASYNTR RDNSEEKSMK CCFL
//
