ID A0A2G2W6T8_CAPBA Unreviewed; 998 AA.
AC A0A2G2W6T8;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
GN ORFNames=CQW23_19801 {ECO:0000313|EMBL:PHT40947.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT40947.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT40947.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT40947.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT40947.1}.
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DR EMBL; MLFT02000008; PHT40947.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2W6T8; -.
DR STRING; 33114.A0A2G2W6T8; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000224567; Chromosome 8.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16655; RING-Ubox_WDSUB1-like; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 3.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR006911; ARM-rpt_dom.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000225; Armadillo.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45958; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR PANTHER; PTHR45958:SF5; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR Pfam; PF04826; Arm_2; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00185; ARM; 8.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50176; ARM_REPEAT; 1.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000224567};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 260..333
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REPEAT 540..582
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT COILED 195..222
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 998 AA; 111097 MW; A25BFB3F1A8BC406 CRC64;
MVPDVIGGPS LGPFADLLSS TIESILELVL TSKNVFIEKK SFAELSAYLN RIVPFLKEIN
WKNINDSAPW ENVIEILNRQ TLDAAQLISD CSKKNKVYLL MSSRFISKRI ENITREISRA
LSCIPLASLD ISSGIKEEIF QLIDSMRTAE FRTAIAEEEI LQKIDSGIEK RSVDRSYANK
LLVSIAEAVG VSTESSALRR EFEEFKNEID NARLRKDQAE ALQMDQIIAL LERADAATSR
QEKEKKYFTK RKSLGSQPLE PLLSFYCPIT REVMTDPVET PSGHTFERCA IEKWLAEGNL
CPMTSKPLNN TMLRPNKTLR QSIEEWRDRN TIITIASMKL KLSSTEEEVL NCLEQIKDIC
EQREIHREWV IMEDYIPILI KLLGLKSRDI RNLVLEVLCI LAKDGDDAKE RIAEVDSALE
SIVHSLGRRI GERKSAVALL LELSNCKSVQ ESIGKVQGCI LLLVTMSSCD DNKAAKDARD
VLENISFSDD NVILMAKANY FKYLLQRLSS GSSDVKLRMA KTLGEMELTD HNKSSLFEEG
VLDSLLSLLS HGEIEVKQEG VKALLNLSSL PKNGQEMIRQ GVMRPLLDML YRHTSSQSLR
ELVAATITKL AFSASSETCV SLLDADEDIY GLFSQVNLNG PAVQKSILQA FCAMCKSPSA
ASIKTKLAQC SSAVQVLVQF CEHGNSNVRS DAIKLFCCLT ENGNEAMIQE HVDQKFIEIL
LKVIKTSEDE EEIASAMGIV SNLPKSPQIS EWLFAADGLP VFSRFLAEVK HTSSDKFQLV
ENAVGALCHF TVSINQQRQK IAGLFPKLVR LLDLGTSLTK KRAAICLAQL SENSQSLSRP
IPKRQGLWCF TPSQVELCPI HRGICTLETS FCLVEAGAVE PLVRVLGDPD PGACEASLDA
LLTLIKDEKL QSGAKVLAEE NAIPSMIKLL DSPSPRLQQK VLNSLERIFR LVEYKLRYGS
SAQMPLVELT QRGTSNVKSL AAKVLAQLNV LHDQSSYF
//
