ID A0A2G2XBM0_CAPBA Unreviewed; 678 AA.
AC A0A2G2XBM0;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=CQW23_03363 {ECO:0000313|EMBL:PHT54877.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT54877.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT54877.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT54877.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT54877.1}.
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DR EMBL; MLFT02000002; PHT54877.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2XBM0; -.
DR STRING; 33114.A0A2G2XBM0; -.
DR Proteomes; UP000224567; Chromosome 2.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR PANTHER; PTHR24015:SF1687; PENTATRICOPEPTIDE (PPR) REPEAT PROTEIN; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF13041; PPR_2; 3.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000224567};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 33..67
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 134..168
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 235..269
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 270..304
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 371..405
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 442..472
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 586..678
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 678 AA; 75807 MW; 03F6BCFAAB9CD6CE CRC64;
MLSKPNSQFL RALPPRGDIR RARQLFDEIP NPDIQSWTLL ITAYKKSGFP EEALKVYEEL
GERKVLPDQL ALLSVTKACA ALGNLIKAKG IHQDVIRFGY RSDLLLGNAL IDMYGKCKYA
QGARDVFDNL RAKDVISWTS MSSCYVNCKL PREALMTFRE MRLKGVRPNP VTLSSVLPAC
SDLKSLNLGR EIHGYIVRNG IHDNVYVSSA LVDMYATCSS IKQAELVFNS THQSDYVLCN
VIMSAYFSNG ECDKALRIFD QLRKGRTKLN HDSWNSVIGG CIQSGRTDKA LQILHEMQQS
GVKPNKITIT SVLPACIDLG SIRRGKEIHG CLLRHLFLED ETVFTALVFM YAKCGDLELS
KRVFYVMPEK DTIAWNTMII GNSMHGKGEE ALLLFREMAS SGVKPNSVTF TGVLSGCSHS
QLVDKGLMIF YSMRKVHGIE PDSEHYSCMV DALSRAGRLE QAYNFIQSMP MKPSAGAWGA
LLGACRVYKN VEMARAAGEQ LLEIEPENAG NYVLLSNIFE AAKLREEASK IRKLMRERGI
IKVPGCSWIQ VKDKVHTFVV GDKNNAQTAD IYRFLTEVGE KMRLAGYLPC TDLVGQDLDA
EEKEYSLCNH SERLAAAFGI LNLDGASSIR VFKNLRICGD CHNAIQYLAK IVGVQIIVRD
PLRFHHFKDG LCSCSDFW
//
