ID A0A2G2XFI7_CAPBA Unreviewed; 635 AA.
AC A0A2G2XFI7;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 13-SEP-2023, entry version 17.
DE RecName: Full=RNA polymerase I-specific transcription initiation factor RRN3 {ECO:0008006|Google:ProtNLM};
GN ORFNames=CQW23_04744 {ECO:0000313|EMBL:PHT56258.1};
OS Capsicum baccatum (Peruvian pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=33114 {ECO:0000313|EMBL:PHT56258.1, ECO:0000313|Proteomes:UP000224567};
RN [1] {ECO:0000313|EMBL:PHT56258.1, ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RC TISSUE=Leaf {ECO:0000313|EMBL:PHT56258.1};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
RN [2] {ECO:0000313|Proteomes:UP000224567}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. PBC81 {ECO:0000313|Proteomes:UP000224567};
RA Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E.,
RA Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C., Kwon J.-K.,
RA Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H., Huh J.H., Kang B.-C.,
RA Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT "Multiple reference genome sequences of hot pepper reveal the massive
RT evolution of plant disease resistance genes by retroduplication.";
RL J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC -!- SIMILARITY: Belongs to the RRN3 family.
CC {ECO:0000256|ARBA:ARBA00010098}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT56258.1}.
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DR EMBL; MLFT02000002; PHT56258.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2XFI7; -.
DR STRING; 33114.A0A2G2XFI7; -.
DR Proteomes; UP000224567; Chromosome 2.
DR GO; GO:0001181; F:RNA polymerase I general transcription initiation factor activity; IEA:InterPro.
DR GO; GO:0006361; P:transcription initiation at RNA polymerase I promoter; IEA:InterPro.
DR InterPro; IPR007991; RNA_pol_I_trans_ini_fac_RRN3.
DR PANTHER; PTHR12790:SF0; RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3-RELATED; 1.
DR PANTHER; PTHR12790; TRANSCRIPTION INITIATION FACTOR IA RRN3; 1.
DR Pfam; PF05327; RRN3; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000224567}.
SQ SEQUENCE 635 AA; 72745 MW; 0E29CA98946B1784 CRC64;
MMTFHRRIAT QINIMGMELH AEQSDYAEME NVEISDTMLF YHVRGALKSA VEGDPDKYKQ
LVTVMGPDER LVPEKVALMV TCLKALSGSV SCLDIVHHQS LISSILKMSM WNYGTDVMDA
LMELVISLAT FSGQYVDLCL EMLVSNFMPP DSFISLLNQS RGILRKGQVI DHVHKTLIFI
AELVPLSPLR LERIITERMP HIFTKEPLIL IYVENMLKLE SGEIGDRVGR TMLLAVMDRL
IDLDVDIAWD DILQEDFTKG IFDMELEDLE GPVDVGQQDG DELRISWMER YFSGNLNAQK
LDSLMVLTFE HLNFCKESGR LRQVFDTLLQ SFQLTVLTAY KSKFAQFVLF YACSLDPENC
GRRFADTLFH KFKTSRYPEW RMSAVAYLAS YLARAKFLPI SFVAEYLESL LEWCSIYCSN
QSGGINPKAH KEFYAACQAM MYVLCFRMRS VLAVPHIRSR ISKHIEDILR HPLSPLMVCL
PSIVEEFLRL AKVTRLDVPD NFVSSNLLES ELSMAFGGRE RLDMFFPFDP CLLMRSDRFI
RPNFVYWSMV RSSYDNDEDD NEGTSDEDEI EICTAGKGMN IANDGAARSY DQDLDEFDNE
MSKMSITPKV AQWFGGELRT DMQMPSRIRP CPDSL
//
