ID A0A2G2YGJ3_CAPAN Unreviewed; 521 AA.
AC A0A2G2YGJ3;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
GN ORFNames=T459_28334 {ECO:0000313|EMBL:PHT68847.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT68847.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT68847.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT68847.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AYRZ02000011; PHT68847.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2YGJ3; -.
DR STRING; 4072.A0A2G2YGJ3; -.
DR EnsemblPlants; PHT68847; PHT68847; T459_28334.
DR Gramene; PHT68847; PHT68847; T459_28334.
DR OMA; KTINECA; -.
DR Proteomes; UP000222542; Chromosome 11.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd02736; RNAP_III_Rpc1_C; 1.
DR Gene3D; 1.10.150.390; -; 1.
DR Gene3D; 6.10.250.2940; -; 1.
DR Gene3D; 6.20.50.80; -; 1.
DR InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR InterPro; IPR007081; RNA_pol_Rpb1_5.
DR InterPro; IPR035698; RNAP_III_Rpc1_C.
DR PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR PANTHER; PTHR19376:SF32; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1; 1.
DR Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT DOMAIN 1..455
FT /note="RNA polymerase Rpb1"
FT /evidence="ECO:0000259|Pfam:PF04998"
FT COILED 105..132
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 521 AA; 58058 MW; 77AABB5DA6F07AFE CRC64;
MGGREGHVDT AVKTADTGYM SRRLMKALED LAVYYDSTVR NASSCIVQFM YGDDGMNPSQ
MEEKKGCPLN FSRLFMKVKA TCPPRGEKSL SYSEICERVN ERLSYHDLNF LIKDLAETLK
KLREALLLGE EKYAGYDLEY LENIALNISG ITKKQLQVFL DTCISQYHLK RLESGTAMGA
IGAQSIGEPG TQMTLKTFHF AGVASMNVTL GVPQIKEIIN AAKKITTPII TAKLLSAANL
TGARMIKARI EKTLLGQMAK SVKIVISLDM ETIQVSQLCI DHSVKQSVLQ TSKLKLNEHQ
VKVLNPRKLE VFPHADKAKL QFELHRLKNK LPSVVVKGIT MVQRAVVNKE QQKDRKNDVK
GETYEFLVEG TGLLAVMGTE GSDGRNTKNN DIMEVKQTLG IEAARVSIID EINYTMSSHG
MTIDLRHMML LADLMTYKGD VLGITRHGVQ KMKDSVLMLA SFEKTTDHLF NASVNGKDDK
IEGVSECIIM GIPMQIVTGM FKLRQCVEQV ELNYQSEPMI S
//
