ID A0A2G2YIB0_CAPAN Unreviewed; 381 AA.
AC A0A2G2YIB0;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 16.
DE RecName: Full=FF domain-containing protein {ECO:0000259|PROSITE:PS51676};
GN ORFNames=T459_28980 {ECO:0000313|EMBL:PHT69493.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT69493.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT69493.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT69493.1}.
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DR EMBL; AYRZ02000011; PHT69493.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2YIB0; -.
DR STRING; 4072.A0A2G2YIB0; -.
DR EnsemblPlants; PHT69493; PHT69493; T459_28980.
DR Gramene; PHT69493; PHT69493; T459_28980.
DR Proteomes; UP000222542; Chromosome 11.
DR GO; GO:0005685; C:U1 snRNP; IBA:GO_Central.
DR GO; GO:0071004; C:U2-type prespliceosome; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 1.10.10.440; FF domain; 2.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR039726; Prp40-like.
DR PANTHER; PTHR11864:SF36; PRE-MRNA-PROCESSING PROTEIN 40A-LIKE ISOFORM X1; 1.
DR PANTHER; PTHR11864; PRE-MRNA-PROCESSING PROTEIN PRP40; 1.
DR Pfam; PF01846; FF; 2.
DR SMART; SM00441; FF; 2.
DR SUPFAM; SSF81698; FF domain; 2.
DR PROSITE; PS51676; FF; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000222542}.
FT DOMAIN 211..266
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 279..333
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
SQ SEQUENCE 381 AA; 43234 MW; BC2799E880BD8476 CRC64;
MILILIVERL LDSKFEFLKV ELIEIRVKAL EGVHSDYGDR HEDPNLVIKK PPVPPLAGPT
PSAIPSMSLQ GIVYVPFFDL TCFHAIFIGT EGRYINVASE SSILSGKVTS PMNETVKMKN
SLEPASPAVA NSEKIRIAVT LGNSVAQPNV KKDAAITEIG GATPSDEKIV ELGPLVYESK
AEAKSAFKNL LESANISQKK KLESEERRVK QKNAQEDFRI MLEDRKELLP SSRWSKAVST
IEHDEHFKAV EQAKDPEDFS ENYVEKLENK EHAKALEEQK RNRVKYLEFL KSCDFIKASS
QWRKVQDRLE TDERCSLLEK IDRLEIFQEY IRDLESEEEE QRKLRMIKDF AAYPAVSSNT
SGSTAKNLFT DVMDELEKQV K
//
