ID A0A2G2YID1_CAPAN Unreviewed; 415 AA.
AC A0A2G2YID1;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 14.
DE RecName: Full=FF domain-containing protein {ECO:0000259|PROSITE:PS51676};
GN ORFNames=T459_28957 {ECO:0000313|EMBL:PHT69470.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT69470.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT69470.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT69470.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AYRZ02000011; PHT69470.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2YID1; -.
DR STRING; 4072.A0A2G2YID1; -.
DR EnsemblPlants; PHT69470; PHT69470; T459_28957.
DR Gramene; PHT69470; PHT69470; T459_28957.
DR Proteomes; UP000222542; Chromosome 11.
DR GO; GO:0005685; C:U1 snRNP; IBA:GO_Central.
DR GO; GO:0071004; C:U2-type prespliceosome; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0045292; P:mRNA cis splicing, via spliceosome; IEA:InterPro.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR Gene3D; 1.10.10.440; FF domain; 3.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR039726; Prp40-like.
DR PANTHER; PTHR11864:SF36; PRE-MRNA-PROCESSING PROTEIN 40A-LIKE ISOFORM X1; 1.
DR PANTHER; PTHR11864; PRE-MRNA-PROCESSING PROTEIN PRP40; 1.
DR Pfam; PF01846; FF; 1.
DR SUPFAM; SSF81698; FF domain; 2.
DR PROSITE; PS51676; FF; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542}.
FT DOMAIN 268..322
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT COILED 323..353
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 415 AA; 47151 MW; D66B4D04109E7A64 CRC64;
MLLQITYQDK ATQTEIVEED TLEKILNTLT TLSMKVDSMG NEIEKLKTNE DKLKSIATNQ
LTQQCAELCR SEDIKVPELE GDDGTLHRTH NVYQSTSVEV RYINLASESS ILSGKVTSPM
IEIVEMKNSS EPASPAVANS KKIRIAVTLG NSVAPPVSET TTTQDTVVYG DGFSLENREN
VKGDAAITEI GGATPSDLKT VELGPLVYES KADCKELSPS SRWSKVISII KHDERFKVVE
QAKDPEDLSE NYVEELENKE HVKALEEQKR NRVKYLEFLK SCDFIKVSSQ WRKVQDRLET
DERCSRLEKI DRLEIFQIRD LVSEEEEQRK LRMEELRKAV RKNHDEFRKL MEEHVAVGIL
DAKTNWHDYC IKFSLSFLCS IKDFAAYPAV SSNTLGLTAT NLFTDVMDEL EKQVK
//
