ID A0A2G2YMZ3_CAPAN Unreviewed; 899 AA.
AC A0A2G2YMZ3;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=DWNN domain-containing protein {ECO:0000259|PROSITE:PS51282};
DE Flags: Fragment;
GN ORFNames=T459_26237 {ECO:0000313|EMBL:PHT71133.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT71133.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT71133.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT71133.1}.
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DR EMBL; AYRZ02000010; PHT71133.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2YMZ3; -.
DR STRING; 4072.A0A2G2YMZ3; -.
DR EnsemblPlants; PHT71133; PHT71133; T459_26237.
DR Gramene; PHT71133; PHT71133; T459_26237.
DR OMA; YQDFGAE; -.
DR Proteomes; UP000222542; Chromosome 10.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0061630; F:ubiquitin protein ligase activity; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IBA:GO_Central.
DR GO; GO:0006511; P:ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR CDD; cd16620; vRING-HC-C4C4_RBBP6; 1.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR014891; DWNN_domain.
DR InterPro; IPR025829; Zn_knuckle_CX2CX3GHX4C.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR15439; RETINOBLASTOMA-BINDING PROTEIN 6; 1.
DR PANTHER; PTHR15439:SF0; SOMETHING THAT STICKS LIKE GLUE, ISOFORM A; 1.
DR Pfam; PF08783; DWNN; 1.
DR Pfam; PF13696; zf-CCHC_2; 1.
DR SMART; SM01180; DWNN; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS51282; DWNN; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 3..76
FT /note="DWNN"
FT /evidence="ECO:0000259|PROSITE:PS51282"
FT REGION 393..500
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 620..899
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 450..464
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 620..648
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 676..788
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 789..810
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 839..881
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 882..899
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 899
FT /evidence="ECO:0000313|EMBL:PHT71133.1"
SQ SEQUENCE 899 AA; 99344 MW; 3C794F560CA42562 CRC64;
MSVYFKFKSA KDYDSIPIDG HFITVGNLKE KIFESKHLGR GTDFDLVVTN AQTNEEYLDE
DTLIPKNTSV LIRRVPGRPR MPIVTAPVTE PDEPQVEYQS EEAQTVKSGF LGGESSATKY
SEDLDWDEFG NDLYAIPEKT PIQLNNQVHD APPPSKADEE SKIKALIDTP SLDWQSQPSD
GFGAGRGYGR GPGGRMMGGR GGRGFGWGGG LERKTPPPGY VCHRCKVPGH FIQHCPTNGD
PNFDIRKVKP PTGIPKSMLM ATPDGSYALP SGANAVLKPN EAAFEREVEG MPSIRSVGDL
PPELHCPLCK EVMKDAVLTS KCCFTSFCDK CIRDYIISKS VCVCGATNIL ADDLLPNKTL
RDTINRILES NNSSAEHGGS ALQVQDMESA RVLPPKIPSP AQSAASKGEL LPPPPPPPPQ
KEENSKALEN AEEGKNESAP QQMLERGRTL KVADVSEATH ESDVKEPASQ GSAPLAEEEV
QQKPVVGEAG KKKKKKKARL PLNPAAAEMQ WRAAQDLAAE NYMMSMGPAA YNPYWTGMQP
GLDGFGAPYP GAMPYNPYGM GPLDVPFMPT VVPHDPFGGQ GFMMPPFGPP MQRDLAADFG
MGFNAGPPIM SRDEFEARKA ELRRKREIER RGESREFPKD REHAREVGSA ADGPPLKPKS
KAVPPSSSSS RPRQPERPSP DLDHHRRRER PSPDLDHHRR PERPSPDLDH RRRPERRSPD
LDHHRRPERS SPDLEYHRRP ERLSPDRRSR DPELPRPSSK RKYEDYDDHH HEDRHQREHA
HRSSSSHHRS ESSASAKPSS TGQSEQPLAV PSKSLDKKKA SVFSRISFPA EDSAATSKKR
KLPSSSEVPL SSSVSHRSAT SNGYHGDYKT ATGSRKSATA SVDYESSDDD RHFKRKPSR
//
