ID A0A2G2YPA0_CAPAN Unreviewed; 723 AA.
AC A0A2G2YPA0;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE SubName: Full=Zinc finger CCCH domain-containing protein 30 {ECO:0000313|EMBL:PHT71505.1};
GN ORFNames=T459_26609 {ECO:0000313|EMBL:PHT71505.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT71505.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT71505.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24441736; DOI=10.1038/ng.2877;
RA Kim S., Park M., Yeom S.I., Kim Y.M., Lee J.M., Lee H.A., Seo E., Choi J.,
RA Cheong K., Kim K.T., Jung K., Lee G.W., Oh S.K., Bae C., Kim S.B.,
RA Lee H.Y., Kim S.Y., Kim M.S., Kang B.C., Jo Y.D., Yang H.B., Jeong H.J.,
RA Kang W.H., Kwon J.K., Shin C., Lim J.Y., Park J.H., Huh J.H., Kim J.S.,
RA Kim B.D., Cohen O., Paran I., Suh M.C., Lee S.B., Kim Y.K., Shin Y.,
RA Noh S.J., Park J., Seo Y.S., Kwon S.Y., Kim H.A., Park J.M., Kim H.J.,
RA Choi S.B., Bosland P.W., Reeves G., Jo S.H., Lee B.W., Cho H.T., Choi H.S.,
RA Lee M.S., Yu Y., Do Choi Y., Park B.S., van Deynze A., Ashrafi H., Hill T.,
RA Kim W.T., Pai H.S., Ahn H.K., Yeam I., Giovannoni J.J., Rose J.K.,
RA Sorensen I., Lee S.J., Kim R.W., Choi I.Y., Choi B.S., Lim J.S., Lee Y.H.,
RA Choi D.;
RT "Genome sequence of the hot pepper provides insights into the evolution of
RT pungency in Capsicum species.";
RL Nat. Genet. 46:270-278(2014).
RN [2] {ECO:0000313|EMBL:PHT71505.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT71505.1}.
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DR EMBL; AYRZ02000010; PHT71505.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2YPA0; -.
DR SMR; A0A2G2YPA0; -.
DR STRING; 4072.A0A2G2YPA0; -.
DR EnsemblPlants; PHT71505; PHT71505; T459_26609.
DR Gramene; PHT71505; PHT71505; T459_26609.
DR OMA; SMSPRGM; -.
DR Proteomes; UP000222542; Chromosome 10.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1370.210; -; 1.
DR Gene3D; 1.25.40.20; Ankyrin repeat-containing domain; 1.
DR InterPro; IPR002110; Ankyrin_rpt.
DR InterPro; IPR036770; Ankyrin_rpt-contain_sf.
DR InterPro; IPR045234; Unkempt-like.
DR InterPro; IPR041367; Znf-CCCH_4.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR14493; UNKEMPT FAMILY MEMBER; 1.
DR PANTHER; PTHR14493:SF138; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 30-LIKE; 1.
DR Pfam; PF12796; Ank_2; 1.
DR Pfam; PF18044; zf-CCCH_4; 1.
DR SMART; SM00248; ANK; 2.
DR SMART; SM00356; ZnF_C3H1; 2.
DR SUPFAM; SSF48403; Ankyrin repeat; 1.
DR PROSITE; PS50297; ANK_REP_REGION; 1.
DR PROSITE; PS50088; ANK_REPEAT; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW ANK repeat {ECO:0000256|ARBA:ARBA00023043, ECO:0000256|PROSITE-
KW ProRule:PRU00023}; DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00723}.
FT REPEAT 94..129
FT /note="ANK"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00023"
FT DOMAIN 300..322
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 300..322
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 165..244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 479..509
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 555..584
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 667..707
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..223
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 723 AA; 78496 MW; 249D2AB5705A307D CRC64;
MNVNHLTVET EDTLASLLEF AANNDIDAFK RWIEHDLSSV HEVGLWYGRQ KGSKQMVLEH
RTPLMVAAMY GSIDVLKLIL SLSGVDVNHS CGRDDSTALH CAASGGSLNA VDAVRLLVEA
GADPNFKDAN GHRPLDVIVT NPKVHTVKPC LENLLKTDAM GDCNPRVSMA SSNSNSPPLS
PSLGNRSPSS PSDTTSSPGS EKCTDLPVPS PSDTTSSPGS EKCTDLPVPS PSEKKEYPID
PSLPDIKNSI YSTDEFRMFS FKIKPCSRAY SHDWTECPFV HPGENARRRD PRKYHYSCVP
CPEFRKGACR RGDMCEYAHG VFECWLHPAQ YRTRLCKDST QCDRRVCFFA HTQEELRPLY
VSTGSAVLSP RSNTSAANAI DFAAAMGLIP GSPSSVSVMS PSAFTPPMSP SANGVSNMGW
PPQNVPALHL PGSNLQSSRL RSSLNARDIP AKDLTTLSDF DVEQQQLLNG LPCLSQSSMS
PNSFNRSVRP KTLTPSNLED LFSAEGSSPR YSDQALAQAG FSPTHKSAVF NQFHQQQQAM
LSPINTKFSP RNVDNPLLQG SFGVPSSRSM SPRGMEPISP MSSRVSILSQ GDKQHQFRSL
SSRDLGSSAA SAIAGSASDT WPNWGIASGE PDWAVRNEEF GRLRRSSSFE LANNGEEPDL
SWVQSLVKES PQEATEKSAS RVSGITGSGA DISEGSTSGS QSEQYDQLGA WMEQMKLDQL
IAR
//
