ID A0A2G2YVI7_CAPAN Unreviewed; 256 AA.
AC A0A2G2YVI7;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 03-MAY-2023, entry version 21.
DE SubName: Full=Elongator complex protein 6 {ECO:0000313|EMBL:PHT73780.1};
GN ORFNames=T459_24565 {ECO:0000313|EMBL:PHT73780.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT73780.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT73780.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- PATHWAY: tRNA modification; 5-methoxycarbonylmethyl-2-thiouridine-tRNA
CC biosynthesis. {ECO:0000256|ARBA:ARBA00005043}.
CC -!- SIMILARITY: Belongs to the ELP6 family.
CC {ECO:0000256|ARBA:ARBA00008837}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT73780.1}.
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DR EMBL; AYRZ02000009; PHT73780.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2YVI7; -.
DR STRING; 4072.A0A2G2YVI7; -.
DR EnsemblPlants; PHT73780; PHT73780; T459_24565.
DR Gramene; PHT73780; PHT73780; T459_24565.
DR OMA; MFTELNS; -.
DR OrthoDB; 366566at2759; -.
DR UniPathway; UPA00988; -.
DR Proteomes; UP000222542; Chromosome 9.
DR GO; GO:0033588; C:elongator holoenzyme complex; IBA:GO_Central.
DR GO; GO:0009926; P:auxin polar transport; IEA:EnsemblPlants.
DR GO; GO:0031538; P:negative regulation of anthocyanin metabolic process; IEA:EnsemblPlants.
DR GO; GO:0008284; P:positive regulation of cell population proliferation; IEA:EnsemblPlants.
DR GO; GO:2000024; P:regulation of leaf development; IEA:EnsemblPlants.
DR GO; GO:0006979; P:response to oxidative stress; IEA:EnsemblPlants.
DR GO; GO:0010015; P:root morphogenesis; IEA:EnsemblPlants.
DR GO; GO:0010016; P:shoot system morphogenesis; IEA:EnsemblPlants.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
DR CDD; cd19495; Elp6; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR018627; ELP6.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR16184; ELONGATOR COMPLEX PROTEIN 6; 1.
DR PANTHER; PTHR16184:SF6; ELONGATOR COMPLEX PROTEIN 6; 1.
DR Pfam; PF09807; ELP6; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000222542}.
SQ SEQUENCE 256 AA; 28624 MW; 9861AFD4AE6F572F CRC64;
MDNSRANLLE EAIGIGIGKG GRVVVVEDCV ETSGAFVLHH FLKRFLHPDS SDVVIFIAFA
HPFSHYERIL RKMGCNLTVH RKNHRFVFLD MLTLECPERN GREAREDGLL ALYGEIEKAV
EIYSSLEGSR TITIMIDDIS LIEVAANGSS NHMLDFLHYC YTLKAKYGCS FVTLNHEDIY
SSANTLQLIL QTEYLADVII KAEPLATGLA SDVHGQLTVL NKGSVSEFGG SSSKVRNFHF
RVKENNVDYF YPGSQT
//
