ID A0A2G2ZQF3_CAPAN Unreviewed; 550 AA.
AC A0A2G2ZQF3;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=tRNA modification GTPase MnmE {ECO:0000313|EMBL:PHT84174.1};
GN ORFNames=T459_12617 {ECO:0000313|EMBL:PHT84174.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT84174.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT84174.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT84174.1}.
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DR EMBL; AYRZ02000004; PHT84174.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G2ZQF3; -.
DR STRING; 4072.A0A2G2ZQF3; -.
DR EnsemblPlants; PHT84174; PHT84174; T459_12617.
DR Gramene; PHT84174; PHT84174; T459_12617.
DR Proteomes; UP000222542; Chromosome 4.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0030488; P:tRNA methylation; IBA:GO_Central.
DR GO; GO:0002098; P:tRNA wobble uridine modification; IBA:GO_Central.
DR CDD; cd14858; TrmE_N; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 1.20.120.430; tRNA modification GTPase MnmE domain 2; 1.
DR InterPro; IPR006073; GTP-bd.
DR InterPro; IPR018948; GTP-bd_TrmE_N.
DR InterPro; IPR027368; MnmE_dom2.
DR InterPro; IPR025867; MnmE_helical.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR027266; TrmE/GcvT_dom1.
DR PANTHER; PTHR42714; TRNA MODIFICATION GTPASE GTPBP3; 1.
DR PANTHER; PTHR42714:SF2; TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL; 1.
DR Pfam; PF01926; MMR_HSR1; 1.
DR Pfam; PF12631; MnmE_helical; 1.
DR Pfam; PF10396; TrmE_N; 1.
DR SUPFAM; SSF103025; Folate-binding domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF116878; TrmE connector domain; 1.
PE 4: Predicted;
KW GTP-binding {ECO:0000256|ARBA:ARBA00023134};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000222542}.
FT DOMAIN 59..186
FT /note="GTP-binding protein TrmE N-terminal"
FT /evidence="ECO:0000259|Pfam:PF10396"
FT DOMAIN 189..366
FT /note="MnmE helical"
FT /evidence="ECO:0000259|Pfam:PF12631"
FT DOMAIN 283..305
FT /note="G"
FT /evidence="ECO:0000259|Pfam:PF01926"
SQ SEQUENCE 550 AA; 60478 MW; 6BB664A544AC3EA2 CRC64;
MFQFFFYCID HSGAVNLSFN AEVSIFFIAE SSTLVLKQDE RLLGFGTVSP LDPAVNASTI
AAIVTSLGGP AAAVGIIRLS GPSAVPIVGR VFHPKVKKKN RSSSEWRPKS HVVEYGLVSD
SHGNVIDEVL VLPMLAPKSY TREDVIELQC HGNEVCLQRV LRACLEAGAK LAEPGEFTLR
AFLNGRLDLS QAENVEKLIS AKSVAAADAA LAGIEGGFSS LVKSLRSQCM ELLTEIEARL
DFDDEMPPLD LNLIMDKIYE MLHDLDNALE TANYDKLLQS GLQIAIVGRP NVGKSSLLNA
WSKSKGIDLD FLVDCPVTRA FARNSNNLVP ESFTMDDEIN SGFQEEHEIT ESLIDSKIAT
MERRLGETII QVIQEQFSSL GIGSTKPTTY GTVSSSAPTI GKSTNYATKG NILPIQIMGD
QNHQTSGNSH STIPMYARMD FPTYDGTDDP LIWTYRCKQF FENQHTIEAE KRFGPLESSN
SMGELVALRQ TSTVEAYQHQ FQEKLARANE LILEHLHVGI FMAGLDDSIK MDVQLLKPPY
LSATMSLARF
//
