ID A0A2G3AJP1_CAPAN Unreviewed; 777 AA.
AC A0A2G3AJP1;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|Pfam:PF13456};
GN ORFNames=T459_02321 {ECO:0000313|EMBL:PHT94439.1};
OS Capsicum annuum (Capsicum pepper).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum.
OX NCBI_TaxID=4072 {ECO:0000313|EMBL:PHT94439.1, ECO:0000313|Proteomes:UP000222542};
RN [1] {ECO:0000313|EMBL:PHT94439.1, ECO:0000313|Proteomes:UP000222542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. CM334 {ECO:0000313|Proteomes:UP000222542};
RX PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S., Lee J.M.,
RA Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M., Lee H.A.,
RA Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E., Lee S.E., Jeon J.,
RA Kim H., Choi G., Song H., Lee J., Lee S.C., Kwon J.K., Lee H.Y., Koo N.,
RA Hong Y., Kim R.W., Kang W.H., Huh J.H., Kang B.C., Yang T.J., Lee Y.H.,
RA Bennetzen J.L., Choi D.;
RT "New reference genome sequences of hot pepper reveal the massive evolution
RT of plant disease-resistance genes by retroduplication.";
RL Genome Biol. 18:R210.1-R210.11(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PHT94439.1}.
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DR EMBL; AYRZ02000001; PHT94439.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G3AJP1; -.
DR STRING; 4072.A0A2G3AJP1; -.
DR EnsemblPlants; PHT94439; PHT94439; T459_02321.
DR Gramene; PHT94439; PHT94439; T459_02321.
DR OMA; ATQDMED; -.
DR Proteomes; UP000222542; Chromosome 1.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd07307; BAR; 1.
DR CDD; cd06222; RNase_H_like; 1.
DR Gene3D; 1.20.1270.60; Arfaptin homology (AH) domain/BAR domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR027267; AH/BAR_dom_sf.
DR InterPro; IPR037488; At2g33490-like.
DR InterPro; IPR044730; RNase_H-like_dom_plant.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR34119:SF14; BAR DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR34119; HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF103657; BAR/IMD domain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000222542}.
FT DOMAIN 2..101
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|Pfam:PF13456"
FT REGION 398..434
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 720..777
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 401..422
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 777 AA; 86094 MW; 88246FDCD4FEE3D0 CRC64;
MGGAIRNHLG TWIICYCATG TSHFHTMVEI EALKYGLDLA IIHNLIPLVI KTDSVEVIHL
LRHSTMPFTD IITNCRSMLK SMRNQVVQHN FREANKVADS SSRLGSTLSQ PNNFIFFQSH
SSAAAAHLLN DANGVFCNLL VSWSMLLNDE GDRAIVLGEL EHSEECRDFS YCRRFKVEEV
RQAVRRMRRG RATGPDEIPV EFWKFVGEAG VSSFSEFSES LREMGDCLLE KTALNDDEES
GKVLLMLGKL QFQLQRLVDN YRSHIIQTIS VPSESLINEL RIVEEMKMQC DEKREVYEKM
VQKYRDKGRI KGTKGESISS HQLQVAYEEY DEGANVFVFR MKSLKQGQSR SLLTQASRHH
AAQLSFFKKA LKSLEEIEPH VKLVTDLHHI DYHFRGLEAD DAGDEDEDEN NSEDDSESLD
DGELSFDYGQ NDQMYTSNHS MELDKVDVPV PEVASKGASK ENLSKSHGGN SFSFFRDVNS
TKSAPLLSGR KVDPAEGAPR MTSSLSNKFQ PYVLPTPIEA KIPDSVKSSN IDPQTKQTKT
TSVVQTWHSS PLDQFQHEKL VAGDKLSGPV ILTAQSLPTE SENNANTGWL PPPLSEGLSS
AQHDLSSVKK VKRQAFSGPL TAKPWPKKPV VSSGSPIAST GFPLHFSLPF LHTSPPEPSS
TPKLTSRTSL MSSPKISELH ELPRPPAKLS SIRPLRQVTH SGPLISKVQE LSATNKAAVS
SAASTLPTPP ALPRSYSIPS RGQMETTLHV SKPLEDMVSP PLTPLALGKN HHTSPAS
//
