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Database: UniProt
Entry: A0A2G3D461_CAPCH
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ID   A0A2G3D461_CAPCH        Unreviewed;        99 AA.
AC   A0A2G3D461;
DT   31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT   31-JAN-2018, sequence version 1.
DT   16-JAN-2019, entry version 10.
DE   RecName: Full=Mediator of RNA polymerase II transcription subunit 9 {ECO:0000256|RuleBase:RU364145};
DE   AltName: Full=Mediator complex subunit 9 {ECO:0000256|RuleBase:RU364145};
GN   Name=MED9 {ECO:0000256|RuleBase:RU364145};
GN   ORFNames=BC332_04083 {ECO:0000313|EMBL:PHU25751.1};
OS   Capsicum chinense (Scotch bonnet) (Bonnet pepper).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae;
OC   Capsiceae; Capsicum.
OX   NCBI_TaxID=80379 {ECO:0000313|EMBL:PHU25751.1, ECO:0000313|Proteomes:UP000224522};
RN   [1] {ECO:0000313|EMBL:PHU25751.1, ECO:0000313|Proteomes:UP000224522}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. PI159236 {ECO:0000313|Proteomes:UP000224522};
RC   TISSUE=Leaf {ECO:0000313|EMBL:PHU25751.1};
RX   PubMed=29089032; DOI=10.1186/s13059-017-1341-9;
RA   Kim S., Park J., Yeom S.I., Kim Y.M., Seo E., Kim K.T., Kim M.S.,
RA   Lee J.M., Cheong K., Shin H.S., Kim S.B., Han K., Lee J., Park M.,
RA   Lee H.A., Lee H.Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E.,
RA   Lee S.E., Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.C.,
RA   Kwon J.K., Lee H.Y., Koo N., Hong Y., Kim R.W., Kang W.H., Huh J.H.,
RA   Kang B.C., Yang T.J., Lee Y.H., Bennetzen J.L., Choi D.;
RT   "New reference genome sequences of hot pepper reveal the massive
RT   evolution of plant disease-resistance genes by retroduplication.";
RL   Genome Biol. 18:R210.1-R210.11(2017).
RN   [2] {ECO:0000313|EMBL:PHU25751.1, ECO:0000313|Proteomes:UP000224522}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. PI159236 {ECO:0000313|Proteomes:UP000224522};
RC   TISSUE=Leaf {ECO:0000313|EMBL:PHU25751.1};
RA   Kim S., Park J., Yeom S.-I., Kim Y.-M., Seo E., Kim K.-T., Kim M.-S.,
RA   Lee J.M., Cheong K., Shin H.-S., Kim S.-B., Han K., Lee J., Park M.,
RA   Lee H.-A., Lee H.-Y., Lee Y., Oh S., Lee J.H., Choi E., Choi E.,
RA   Lee S.E., Jeon J., Kim H., Choi G., Song H., Lee J., Lee S.-C.,
RA   Kwon J.-K., Lee H.-Y., Koo N., Hong Y., Kim R.W., Kang W.-H.,
RA   Huh J.H., Kang B.-C., Yang T.-J., Lee Y.-H., Bennetzen J.L., Choi D.;
RT   "Multiple reference genome sequences of hot pepper reveal the massive
RT   evolution of plant disease resistance genes by retroduplication.";
RL   J. Anim. Genet. bioRxivorg:115410-115410(2017).
CC   -!- FUNCTION: Component of the Mediator complex, a coactivator
CC       involved in the regulated transcription of nearly all RNA
CC       polymerase II-dependent genes. Mediator functions as a bridge to
CC       convey information from gene-specific regulatory proteins to the
CC       basal RNA polymerase II transcription machinery. Mediator is
CC       recruited to promoters by direct interactions with regulatory
CC       proteins and serves as a scaffold for the assembly of a functional
CC       preinitiation complex with RNA polymerase II and the general
CC       transcription factors. {ECO:0000256|RuleBase:RU364145}.
CC   -!- SUBUNIT: Component of the Mediator complex.
CC       {ECO:0000256|RuleBase:RU364145}.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU364145}.
CC   -!- SIMILARITY: Belongs to the Mediator complex subunit 9 family.
CC       {ECO:0000256|RuleBase:RU364145}.
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:PHU25751.1}.
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DR   EMBL; MCIT02000002; PHU25751.1; -; Genomic_DNA.
DR   OrthoDB; 1535477at2759; -.
DR   Proteomes; UP000224522; Chromosome 2.
DR   GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR   GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   InterPro; IPR011425; Med9.
DR   InterPro; IPR038790; Med9_plant.
DR   PANTHER; PTHR37188; PTHR37188; 1.
DR   Pfam; PF07544; Med9; 1.
PE   3: Inferred from homology;
KW   Activator {ECO:0000256|RuleBase:RU364145};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000224522};
KW   Nucleus {ECO:0000256|RuleBase:RU364145};
KW   Reference proteome {ECO:0000313|Proteomes:UP000224522};
KW   Signal {ECO:0000256|SAM:SignalP};
KW   Transcription {ECO:0000256|RuleBase:RU364145};
KW   Transcription regulation {ECO:0000256|RuleBase:RU364145}.
FT   SIGNAL        1     19       {ECO:0000256|SAM:SignalP}.
FT   CHAIN        20     99       Mediator of RNA polymerase II
FT                                transcription subunit 9.
FT                                {ECO:0000256|SAM:SignalP}.
FT                                /FTId=PRO_5013841378.
FT   COILED       66     86       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   99 AA;  11263 MW;  37FCCDAC57D7DE98 CRC64;
     MRPFVLTLIV TLQLVENLAD TIENGNRDQH SDALVTELKN QFEKCQQLLI SISGSISSRS
     MTVEGQKRKK AECEQLLNQR RDLISKYKGS VEDIIKSEL
//
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