ID A0A2G5CN28_AQUCA Unreviewed; 885 AA.
AC A0A2G5CN28;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=AQUCO_04500093v1 {ECO:0000313|EMBL:PIA32257.1};
OS Aquilegia coerulea (Rocky mountain columbine).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Ranunculales; Ranunculaceae; Thalictroideae;
OC Aquilegia.
OX NCBI_TaxID=218851 {ECO:0000313|EMBL:PIA32257.1, ECO:0000313|Proteomes:UP000230069};
RN [1] {ECO:0000313|EMBL:PIA32257.1, ECO:0000313|Proteomes:UP000230069}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Goldsmith {ECO:0000313|Proteomes:UP000230069};
RA Hodges S., Kramer E., Nordborg M., Tomkins J., Borevitz J., Derieg N.,
RA Yan J., Mihaltcheva S., Hayes R.D., Rokhsar D.;
RT "WGS assembly of Aquilegia coerulea Goldsmith.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NFX1 family.
CC {ECO:0000256|ARBA:ARBA00007269}.
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DR EMBL; KZ305062; PIA32257.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5CN28; -.
DR STRING; 218851.A0A2G5CN28; -.
DR InParanoid; A0A2G5CN28; -.
DR OrthoDB; 1412at2759; -.
DR Proteomes; UP000230069; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd06008; NF-X1-zinc-finger; 6.
DR InterPro; IPR034078; NFX1_fam.
DR InterPro; IPR000967; Znf_NFX1.
DR InterPro; IPR001841; Znf_RING.
DR PANTHER; PTHR12360:SF1; NF-X1-TYPE ZINC FINGER PROTEIN NFXL1; 1.
DR PANTHER; PTHR12360; NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1; 1.
DR Pfam; PF01422; zf-NF-X1; 11.
DR SMART; SM00438; ZnF_NFX; 11.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000230069};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT TRANSMEM 843..860
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 82..154
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..30
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 885 AA; 99295 MW; EA4ACAE5919662BA CRC64;
MASSAKTAQQ QQHHVSHISS DSDTDSDTNT TTTITTVTHT DLEDSIFKSY IHISGGHSSS
SPQDLSKIQS FLISSRSGAL SCLICLEKIR ITDPTWSCIN GCYAVFHLLC IQSWARQASD
LAAERAIARL SREHFPIAAA NALENSNWNC PKCREEYSKT LIPKYYYCFC GKVENPISDP
WILPHSCGEV CNRPLKYNCG HYCLLLCHPG PCPSCPKLVK SRCFCGKIED VRRCGFKNFA
CNGVCLKVLD CGVHKCSENC HDGLCPPCRE KSVYRCECGK KKEERECFER KYRCENPCER
LLDCGKHVCD RGCHEGLCGE CPLQGKRTCP CGKRKYEGMA CDVAAPTCGS TCDKMLSCGF
HKCPERCHRG SCIETCRTVV MKSCRCGSLK KEVPCCQALV CERKCQRVRD CGRHACRRRC
CDGDCPPCSE ICGRKLRCNN HKCPSPCHRG ACAPCPLMVT ISCACGETRF EVPCGTEANQ
KPPKCPRPCG IAPLCRHAPN RKPHKCHYGA CPACRLICDE EFKCGHKCKL RCHGPKPPPN
LEFTLKPKKK KVNQQPEYTP GSPCPLCPEL VWRPCLGQHI GEERMVVCSD RSVFSCQNLC
GNLLTCGNHY CTKTCHALKS QTLSSGVHVK SESCEDCDLR CQKDRKLSCP HPCPLPCHPG
DCPLCKVLIK RSCHCGAMVH VFECTYYNSL SEEEQLKIRS CRGPCHRKLL NCSHLCPETC
HPGACPSPDK CSKKVNVRCS CQNLKKEWIC QEVQAAYRNS GRDPQDFSKT QFGIGLLPCD
SECARKLKVA DSELQLRKSK VIERKETDVT KPVPKRRKRR ERLQEDEQIS MLQAIGATLR
RCLLFILVVL VVIATLYFGY KGLLLLSDWM NEIEQKRQRR RFPGM
//
