ID A0A2G5E1L4_AQUCA Unreviewed; 672 AA.
AC A0A2G5E1L4;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 23.
DE RecName: Full=XPG-I domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=AQUCO_01300437v1 {ECO:0000313|EMBL:PIA49662.1};
OS Aquilegia coerulea (Rocky mountain columbine).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Ranunculales; Ranunculaceae; Thalictroideae;
OC Aquilegia.
OX NCBI_TaxID=218851 {ECO:0000313|EMBL:PIA49662.1, ECO:0000313|Proteomes:UP000230069};
RN [1] {ECO:0000313|EMBL:PIA49662.1, ECO:0000313|Proteomes:UP000230069}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Goldsmith {ECO:0000313|Proteomes:UP000230069};
RA Hodges S., Kramer E., Nordborg M., Tomkins J., Borevitz J., Derieg N.,
RA Yan J., Mihaltcheva S., Hayes R.D., Rokhsar D.;
RT "WGS assembly of Aquilegia coerulea Goldsmith.";
RL Submitted (SEP-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the XPG/RAD2 endonuclease family. GEN subfamily.
CC {ECO:0000256|ARBA:ARBA00038112}.
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DR EMBL; KZ305030; PIA49662.1; -; Genomic_DNA.
DR EMBL; KZ305030; PIA49664.1; -; Genomic_DNA.
DR STRING; 218851.A0A2G5E1L4; -.
DR OrthoDB; 26655at2759; -.
DR Proteomes; UP000230069; Unassembled WGS sequence.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR CDD; cd09869; PIN_GEN1; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR006086; XPG-I_dom.
DR InterPro; IPR006084; XPG/Rad2.
DR InterPro; IPR006085; XPG_DNA_repair_N.
DR PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR PANTHER; PTHR11081:SF59; FLAP ENDONUCLEASE GEN HOMOLOG 1; 1.
DR Pfam; PF00867; XPG_I; 1.
DR Pfam; PF00752; XPG_N; 1.
DR PRINTS; PR00853; XPGRADSUPER.
DR SMART; SM00484; XPGI; 1.
DR SMART; SM00485; XPGN; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000230069}.
FT DOMAIN 1..96
FT /note="XPG N-terminal"
FT /evidence="ECO:0000259|SMART:SM00485"
FT DOMAIN 128..198
FT /note="XPG-I"
FT /evidence="ECO:0000259|SMART:SM00484"
FT REGION 587..612
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 630..672
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 587..604
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 672 AA; 75564 MW; EB4D50EC5D358C58 CRC64;
MGIGGNFWDL LKPYVRNENY DFLRNKKVAI DLSYWIVQHE TALKNKVRNP HLRVTFFRTI
NLFSKFGAFP VFVIDGVPSP LKARARIERF LRFSGVDISN LPKVNDGVSV ERNGAFQKCV
HECVELLQLL GMPVLKASCE AEALCAQLNY EGHVDACITA DSDALLYGAK CVIKSLSPNS
KEPFECYFMS DLETGLGLKR LHFVAISLLV GNDHNLGGVS GIGIETALRF VRMFPEDEIL
KRLHELGNGN IPVSQINDNY LGDCDVTILS ENSPKTKLRH CSYCGHPGSK SAHSKIACEH
CVVSDNGGCS QKPSGFKCEC SSCNLARKSK ERKKHESWQL SVCRKISSEK NFPNEEIIEM
YLSHKNGSWT ESPISLLWGK PKLETLVEFL GYHQHWDPSY IRQRILPMLS THFLRDMVSN
PIENLLLHGQ YEFYSIKRAK ITYGRPCYLV TWRKAAPCIG NARDNIGKEL SDVQNEDIPG
VIEVVDLLDE PDVPQILVTD VQNEDIPGVI EVVDLLDAPD VPQILVSDVQ NEDIPRVIEV
VDLLDEPDVP QIIVDDGCSY LLTEENMELV QAAFPNKVER FLQEKELKSR EKNSSKKFNG
KHNKFETPKS SSTGIQLSIK EFYRATKALA HAKQGEHSPK GPEIQAKGFA KGKRTPPTPN
LSKSARRRLL FD
//