ID A0A2G5SQ86_9PELO Unreviewed; 706 AA.
AC A0A2G5SQ86;
DT 31-JAN-2018, integrated into UniProtKB/TrEMBL.
DT 31-JAN-2018, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=Nuclear receptor domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=Cni-daf-12 {ECO:0000313|EMBL:PIC17083.1};
GN Synonyms=Cnig_chr_X.g23452 {ECO:0000313|EMBL:PIC17083.1};
GN ORFNames=B9Z55_023452 {ECO:0000313|EMBL:PIC17083.1};
OS Caenorhabditis nigoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=1611254 {ECO:0000313|EMBL:PIC17083.1, ECO:0000313|Proteomes:UP000230233};
RN [1] {ECO:0000313|Proteomes:UP000230233}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JU1422 {ECO:0000313|Proteomes:UP000230233};
RA Yin D., Schwarz E.M., Thomas C.G., Felde R.L., Korf I.F., Cutter A.D.,
RA Schartner C.M., Ralston E.J., Meyer B.J., Haag E.S.;
RT "Rapid genome shrinkage in a self-fertile nematode reveals novel sperm
RT competition proteins.";
RL Submitted (OCT-2017) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the nuclear hormone receptor family.
CC {ECO:0000256|ARBA:ARBA00005993}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:PIC17083.1}.
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DR EMBL; PDUG01000006; PIC17083.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A2G5SQ86; -.
DR STRING; 1611254.A0A2G5SQ86; -.
DR Proteomes; UP000230233; Chromosome x.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR CDD; cd06966; NR_DBD_CAR; 1.
DR CDD; cd06929; NR_LBD_F1; 1.
DR Gene3D; 3.30.50.10; Erythroid Transcription Factor GATA-1, subunit A; 1.
DR Gene3D; 1.10.565.10; Retinoid X Receptor; 1.
DR InterPro; IPR035500; NHR-like_dom_sf.
DR InterPro; IPR000536; Nucl_hrmn_rcpt_lig-bd.
DR InterPro; IPR001628; Znf_hrmn_rcpt.
DR InterPro; IPR013088; Znf_NHR/GATA.
DR PANTHER; PTHR24082; NUCLEAR HORMONE RECEPTOR; 1.
DR PANTHER; PTHR24082:SF494; NUCLEAR HORMONE RECEPTOR FAMILY MEMBER DAF-12; 1.
DR Pfam; PF00105; zf-C4; 1.
DR PRINTS; PR00047; STROIDFINGER.
DR SMART; SM00430; HOLI; 1.
DR SMART; SM00399; ZnF_C4; 1.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 1.
DR SUPFAM; SSF48508; Nuclear receptor ligand-binding domain; 1.
DR PROSITE; PS51843; NR_LBD; 1.
DR PROSITE; PS00031; NUCLEAR_REC_DBD_1; 1.
DR PROSITE; PS51030; NUCLEAR_REC_DBD_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Reference proteome {ECO:0000313|Proteomes:UP000230233};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 81..156
FT /note="Nuclear receptor"
FT /evidence="ECO:0000259|PROSITE:PS51030"
FT DOMAIN 469..706
FT /note="NR LBD"
FT /evidence="ECO:0000259|PROSITE:PS51843"
FT REGION 163..205
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 232..279
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 340..375
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 166..190
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 248..269
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 356..375
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 706 AA; 79341 MW; 80A96878287F0C93 CRC64;
MADNLLSSQN YINWTMLNKF YGKPQMSTPD DPVIHSPPSI GAAPGMNGYH GSGVKLEEGS
GACGSPDDGN MDSSEESRRR QKTCRVCGDH ATGYNFNVIT CESCKAFFRR NALRPKEFKC
PYSEDCEINS VSRRFCQKCR LRKCFTVGMK KEWILNEEQL RRRKNSRLNN NSTSNKRAQP
GHQMSPQHPG QPQPHQSPVP HPGVAVYQQP QRPLTINPMD NQMMHHMQNR PNVMPQLISP
PGAQPYPLTS PVGSSASDSP PNRSLTMMHN GEKSPDGYDP NMMAHRISQT SLNCRPKMDD
NGQVVLTAEE YKNLLARIPQ NQPGLMNEEE PINKRAAYNC NGHPMPAEHT PPYSAPMSDM
SLSRNNSTSS GSSVPTQSHF DIASFGMGIV TATGGGDAAE EMYRKMTSFY DQCIQSALDS
PESQEPKMIE NKPDYMTPNH NFQYNADPYH VAAEIQPLER NVNYQLNATE LKALDNVREA
FFGMDDPMEQ GRQLQSFLKA NKSPADIMNI MDVTMRRFVK VAKGVPAFRE VSQEGKFSLL
KGGMIEMLTV RGVTRYDPHT NSFKTPTIKG QNVSVNVDDM FAKLNSNAQA QKEKCLEFFG
FFDEEIKKNE LAVYLVMLAV LFSVRIDPPM NENDVRIVTD QHNHFMSLLN RYLESLYGEQ
ARRIFERLPK ALGMLNDIAR NAGMLFMGAV RSGEAEELPG EFFKIK
//